Ralstonia pickettii 12J: Rpic_2773
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Entry
Rpic_2773 CDS
T00762
Name
(GenBank) transcriptional regulator, AraC family
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
rpi
Ralstonia pickettii 12J
Pathway
rpi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rpi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Rpic_2773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rpi03000
]
Rpic_2773
03400 DNA repair and recombination proteins [BR:
rpi03400
]
Rpic_2773
Enzymes [BR:
rpi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Rpic_2773
Transcription factors [BR:
rpi03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Rpic_2773
DNA repair and recombination proteins [BR:
rpi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Rpic_2773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
RecR_HhH
HHH
Motif
Other DBs
NCBI-ProteinID:
ACD27897
UniProt:
B2UB48
LinkDB
All DBs
Position
1:2884756..2886231
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AA seq
491 aa
AA seq
DB search
MHLDHNACYHAVQSRDRRFDGWFFVGVTSTGVYCRPVCAVRTPLEKNCRFFTTAAAAERA
GFRPCLRCRPELAPGHSLAEMSSNLARAAARMIDEGFLQEHDLTALAAAVGVTDRHLRRI
FRAEFDVSPIEYAQTQRLLLAKQLLTDTAMPVGDVAFAAGFGSVRRLNSGFIERYGFTPT
RLRSRTTAPRTEDGPTLMLGCRPPFAWPALLEFLRARAVDGVEVVTADSYARTITVDYGG
VRHIGWLHARNVPQRHAVALTLSPSLLHAMPPVLARTRRLFDLDCRPDLVDAHLGTLAAE
TPGLRVPGAVDGFEIAVRAIAGQVISLAQARRILGRMTAVYGVPLPQPSEGLTTAFPSGA
ALANSDAQALSAQTGLQASRAATVIELARAIDGGSLRLEPLVPLAPTLAALQALPGVGEW
TAQYIAMRALGWPNAFPLGDYVLRKRLADGDGALPTRRAMVERAKPWAPWRAYAAMHLWH
REDALTQPASH
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgcatctcgaccacaacgcctgctaccacgccgtgcaatcgcgcgaccgacgttttgac
ggctggttcttcgtcggtgtgacatccaccggcgtatattgccgcccggtctgcgcggtg
cgcacgccgctggagaagaactgccgcttcttcaccacggcggccgctgccgagcgcgcg
ggttttcggccctgcctgcgctgccggccagaactggcaccggggcacagcctggctgag
atgtcgtccaaccttgcacgcgccgccgctcgcatgatcgacgaaggctttctgcaagaa
cacgacctgaccgcgctggctgcagccgtgggcgtgaccgaccgccacttgcgccgcatc
ttccgcgcggagttcgacgtctcgcccatcgagtacgcgcaaacgcagcgcctgctgctc
gccaaacagctgctgaccgatacggccatgcccgtcggcgacgtcgcctttgccgccggc
ttcggaagcgtccggcgcctgaacagcggctttatcgagcgctacggctttacacccacg
cgcctgcgctcgcgcacgacggcaccgcgcaccgaagacggccccacgctcatgctcggc
tgccgtccgccgtttgcgtggccggcgttgctcgaatttctgcgcgcccgtgccgtcgac
ggcgtcgaggtggtcaccgccgacagctacgcccgcacgatcaccgtcgactacggcggc
gtgcggcacatcggctggctgcacgcgcgcaatgtgccgcaacgccacgcggtggcactg
accctgtcgcccagtctgctgcacgccatgccgcccgtgctggcgcgtacgcggcggctg
ttcgatctcgattgccgcccggacctagtcgatgcgcacctcggcacgcttgctgccgag
acgcccggcctgcgcgtgccgggcgccgtggacggcttcgagattgccgtgcgcgccatc
gccgggcaggtcatttcgctggcgcaggcccggcgcattctcggacgcatgactgccgtg
tacggcgtgccgctgccgcaaccgagcgaagggctgaccacagcatttccgagcggggct
gcactggcgaacagcgatgcccaggcgctgtccgcgcaaaccggtctgcaagccagccgc
gctgctaccgtcatcgaactcgcccgcgccatcgacggcggaagcctgcggcttgaacca
ctggtgccgctcgcccccacgctggccgccttgcaagcgctgcccggtgtcggcgaatgg
acagcgcaatacatcgccatgcgcgcactgggctggccgaacgcattcccgctgggcgat
tacgtcctgcgcaaacgccttgcagacggagacggcgcgctgcctactcgccgtgccatg
gtcgagcgcgccaaaccgtgggccccgtggcgcgcttacgccgccatgcatctctggcat
cgcgaggatgcgctgacccagcctgcgtcgcattga
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