Ralstonia pickettii 12J: Rpic_2804
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Entry
Rpic_2804 CDS
T00762
Name
(GenBank) exodeoxyribonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
rpi
Ralstonia pickettii 12J
Pathway
rpi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rpi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Rpic_2804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpi03400
]
Rpic_2804
Enzymes [BR:
rpi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Rpic_2804
DNA repair and recombination proteins [BR:
rpi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Rpic_2804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
PE
LSDAT_euk
Lipase_GDSL_2
Motif
Other DBs
NCBI-ProteinID:
ACD27928
UniProt:
B2UB79
LinkDB
All DBs
Position
1:complement(2913094..2914503)
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AA seq
469 aa
AA seq
DB search
MDATAPTATSAPEVSAAPDAASAPNRGGQEVLSVSDVNRRIAGLLERNFPLGWVRGEISN
FTRAASGHWYFSLKDAAAQIRCVMFKGRNQYADFTPREGEAVEVRALVTLYEARGELQLS
VEAIRRAGLGNLYEAFLRLKAALEAQGLFDVDRKRPLPRHPRAIGVVTSLQAAALRDVLT
TLRRRAPHVPVVVYPVPVQGAGASERIAAMLERVNARAEVDVVILCRGGGSIEDLWAFNE
EPVARAVAASEIPIVAGVGHETDVTIVDFVADVRAPTPTAAAELVSPDRARMLRDVGRDW
DALSAQFRRQLDRRAQTVDWLARRLRSPQTQMRERRTQLAHLEGRLRFALTGRVQRAEHL
QRLLTMRLAAARPDATRERTRLDQAEATLARVMRHTLSRAQERLARQHTGLELLAPQRTL
ERGYAVLLDAKGHAIRDPHALHARARIEARLAQGTADIEIACVQPKLEL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggatgccactgcacccacggccacatccgcgccggaggtgtcggctgcacctgatgcc
gcgtcagcaccgaaccggggcgggcaggaggtgctctccgtcagcgatgtcaatcgccgc
attgcggggctgcttgaacgcaactttccgctgggctgggtgcgcggcgagatctcgaac
ttcacgcgcgcggccagcggccattggtatttctcgctcaaagatgcagccgcgcagatc
cgctgcgtgatgttcaagggccgcaaccagtacgccgatttcaccccgcgcgaaggcgag
gccgtggaggttcgcgcgctggtcacgctgtatgaagcgcgcggcgaactgcaattgagc
gttgaagccatccgccgggcaggcctgggcaatctgtacgaggctttcctgcggctgaag
gccgcgctggaggcgcaaggcctgttcgacgtcgaccgcaagcggccgctgccacggcat
ccgcgcgcgatcggcgtggtgacgtcactgcaggcggcggccttgcgcgacgtgctgacc
acgctgcgccggcgcgcgccgcatgtgccggtggtggtgtatcccgtgccggtgcagggt
gccggtgcgtcggagcgtatcgctgccatgctggaacgggtcaatgcccgggcagaggtc
gacgttgtcatcctgtgccggggcggaggcagcattgaagacctgtgggccttcaatgaa
gaaccggtggcccgtgcggtggccgcatccgaaattcccatcgtggcaggtgtcgggcat
gaaacagatgtgactatcgtcgactttgtggccgatgtgcgcgcacccaccccgactgct
gcggccgaactcgtcagccccgatcgtgcccgcatgctgcgcgatgtgggccgcgactgg
gatgcgctgtccgcccagttccgccgccagctcgatcgccgcgctcagaccgtcgattgg
ctcgcgcgccgcctgcgcagcccgcagacccagatgcgcgaacgccgcacgcagctcgcc
cacctggagggccgcctgcgctttgccctgacgggccgcgtgcagcgcgcggaacatctg
cagcgtctgctgacgatgcgtctggcggcagcccgccccgacgccacgcgagagcgcact
cggctggaccaagccgaagcaacgctggcacgcgtcatgcgacacacgctgtctcgcgcc
caagaacgcctggcacgtcagcacaccggcctggaactgctggcgccgcagcgcacgctg
gagcgcggctatgcggtgctgctcgacgccaagggccatgccatacgcgatccgcacgca
ctgcatgcccgggcacggatcgaggcgcgactggcgcagggtacggccgacatcgaaatc
gcctgcgtgcaaccgaagctcgaactgtga
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