Ralstonia pickettii 12J: Rpic_3023
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Entry
Rpic_3023 CDS
T00762
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
rpi
Ralstonia pickettii 12J
Brite
KEGG Orthology (KO) [BR:
rpi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpi03016
]
Rpic_3023
Enzymes [BR:
rpi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Rpic_3023
Transfer RNA biogenesis [BR:
rpi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Rpic_3023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
ACD28146
UniProt:
B2UCE1
LinkDB
All DBs
Position
1:complement(3150703..3152799)
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AA seq
698 aa
AA seq
DB search
MQLLFEEGGEIRAGTVLSQQGEAYQVELPSAKRTKVKSRDVLLQFAQPSAGELSQAAQAL
SAEIDLDFLWECASADEFGFTDLAGEYFGAGANATQQAALAIALHGSPIYFRRKGRGRYQ
RAPEDQLKAALAGLERKKQQAALQAEYEAELKAMRLPEAFRGKTLQLLFKPDKNSLEYKA
LDAACTVLGLSPMRLMVAVGGIANARALHEARFLSECFPKGTGFPDVTVPEPAMELPAAD
VRAFSIDDVTTTEIDDAISVTPIDDATVRIGIHIAAPGFGIQRGEPLDVIARQRLSTVYF
PGDKITMLPESVVDRYTLQEGRACPALSLYVTVDRATWAVTASETRCESVTVAANLRHNL
LDDVITADALADGSGDYPFKAELAVLWPFVCALYDGRQQARIASGLKPEGAQKGDYSFYI
DAIPEADGGGERVRIEQRKRGSPLDKIVAELMILANSTWGRMLADAGVPGIYRTQKAWGM
HRTRMQTYPAPHEGLGVAQYAWSTSPLRRYVDLVNQWQIAAVAQHGVTAKLIAPFKPKDA
DLLAAVADFEATYAAYADHQSTMERYWCLRWLKQENRTRMQAVVLKEGAVRFADIPLVTK
VPELAQTPRGTHVVLDVLDTDEISLEVSCRVVEILAPEAGAQAEAEAIEEELAAAEAEAD
VPAEPQPAADGEEARAEADAAVAPPPQDGESGGTPAAA
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgctgtttgaagaaggcggcgaaatccgcgcgggcactgtcttgtcccaacag
ggcgaggcctatcaggtcgagttgccgagcgccaagcgcaccaaggtcaaatcgcgcgac
gtgttgctgcaattcgcgcagccgtccgccggtgagctgtcgcaggcggcccaggcgctg
tcggcagagatcgacttggatttcctctgggaatgcgcttcagcggacgagttcggcttc
accgatttggccggcgagtattttggcgccggcgccaatgccacacagcaggcggcgctg
gccatcgcgctgcatggctcgccgatctacttccgccgcaagggccgaggccgctatcag
cgcgcacctgaagaccaactgaaggccgcgctcgcaggcttggagcgcaagaagcagcaa
gctgctctgcaagccgaatacgaagccgagctgaaggcgatgcgactgcccgaggccttc
cgcggcaagacgctgcaactgctgttcaagccggacaagaacagtctcgaatacaaggcg
ctcgatgcggcgtgcacggtgctgggcctgtcgccgatgcgcctgatggtggcagtgggc
ggcattgccaatgcccgcgcgctgcatgaggcgcgtttcctttcggaatgcttcccgaag
ggcaccggtttcccggatgtgaccgtgccggaaccggcgatggagctgccggccgccgac
gtgcgcgccttttcgatcgatgacgtgaccaccacggaaatcgacgatgccatctccgtt
acgcccattgatgacgccacggtgcggatcggtattcacattgccgcgccgggcttcggc
atccagcgtggcgagccgttggacgtgattgcacgccagcgtttgtcgaccgtgtatttc
cccggcgacaagatcacgatgttgccggagtcggtggtggatcgctacacgctgcaagaa
gggcgcgcgtgcccagcgctgtcgctgtatgtgacggtcgaccgtgcaacgtgggcggtc
accgcgagcgagacgcgctgcgaatccgtgaccgtggcggccaacctgcgccacaacctg
ctcgacgacgtgatcaccgccgacgcgctggccgatggctcgggcgactacccgttcaag
gccgaactggccgtgttgtggccgtttgtgtgcgcgttgtacgacggccgccagcaggca
cgcattgccagcggcctgaagcccgagggcgcgcagaagggcgattattcgttctacatc
gatgcgattcccgaggccgatggtggcggcgagcgcgtgcggatcgaacagcgcaaacgc
ggctcgccgctggacaagatcgtcgccgaattgatgatcctggccaacagcacgtggggc
cgcatgctggccgacgctggggtgccgggcatctatcgcacgcagaaggcctggggtatg
caccgcacgcgcatgcagacgtatccggcgccgcatgaaggtctgggcgtggcgcagtat
gcgtggagcacctcgccgctgcgccgctatgtcgatctggtcaatcaatggcagatcgct
gcggtggcgcagcatggcgtgacggccaagctgatcgcgccgttcaagcccaaagatgcc
gacctgctggccgccgtggccgactttgaagccacctacgctgcctatgccgaccaccag
tcgaccatggagcgctactggtgcctgcgctggctcaagcaggaaaaccgaacgcgcatg
caggccgtggtgctcaaggaaggcgccgtgcgcttcgccgacattccgctggtgacgaag
gtgccggaactggcacagacgccacgcggcacgcatgtcgtgctcgatgtcctggacacc
gacgagatcagcctggaagtgtcgtgccgcgtggttgaaatcctcgcgcccgaagcgggc
gcacaagctgaagccgaagccattgaagaagaactggccgcggcagaggctgaggctgat
gtgccggctgaaccacaaccggctgctgatggggaagaggctcgcgcagaagccgacgcg
gctgtggcgccgccgccgcaagacggcgagagcggtggaacgcctgccgctgcctaa
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