Ralstonia pickettii 12J: Rpic_3104
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Entry
Rpic_3104 CDS
T00762
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
rpi
Ralstonia pickettii 12J
Pathway
rpi00061
Fatty acid biosynthesis
rpi00071
Fatty acid degradation
rpi01100
Metabolic pathways
rpi01212
Fatty acid metabolism
rpi02024
Quorum sensing
Module
rpi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rpi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Rpic_3104
00071 Fatty acid degradation
Rpic_3104
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rpic_3104
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rpi01004
]
Rpic_3104
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpi04147
]
Rpic_3104
Enzymes [BR:
rpi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Rpic_3104
Lipid biosynthesis proteins [BR:
rpi01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
Rpic_3104
Exosome [BR:
rpi04147
]
Exosomal proteins
Exosomal proteins of breast milk
Rpic_3104
Exosomal proteins of breast cancer cells
Rpic_3104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ACD28227
UniProt:
B2UCZ2
LinkDB
All DBs
Position
1:complement(3242533..3244242)
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AA seq
569 aa
AA seq
DB search
MDKPWLKQYPAGVPAEIDASQYRSLAHLLEDSFQKNRNRRAFECMGKVLTYGELDTLSRQ
LAAWLQSRGLAPGARVALMMPNVLQYPVALAAVLRAGYVVVNVNPLYTPRELEHQLKDSG
AEAIIILENFATTLQQVLPNTPVKHIVVASMGDMLGGLKGMLVNFVVRSVKKMVPAWELP
SCIRFNTALQEGAKQTLKPTSVGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQSEAW
MNPALTKPGRDGRMLAADEEIVTITALPLYHIFALTVCCLLSMRKGGLAVLIPNPRDIPG
FIKVLKQYRFHMFPAVNTLYNALLNNPEFKDVDCSNLRVANGGGMAVQEAVAKKWLEVTG
CPIIEGYGLSETSPSAICNPTDTDKFSGTVGLPIPGTEIAIRDDEGRDQPIGQPGEICIR
GPQVMAGYWKRPDETAKVMYADGFFKTGDVGVMDERGYTKIVDRKKDMILVSGFNVYPNE
IEGVVAMCPGVLEVAAVGVPDVHSGEVVKLFVVRRDPTLTEQKLQEFCKDQLTGYKRPKF
IEFRNELPKTNVGKILRRELRDEAMKKRA
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggataaaccgtggctgaagcagtaccccgccggggtgccggccgagatcgatgcatcg
cagtatcgatcgctggcccacctgcttgaggattctttccaaaagaaccgcaaccgccgt
gcgtttgaatgcatgggcaaggtactgacctatggcgagctcgatacgctgtcgcgccaa
ctggcggcgtggctgcaatcgcgcggtctggcgcccggcgcccgcgttgcgctgatgatg
ccgaacgtgctgcagtacccggtggcgctggccgccgtgctgcgtgcaggctatgtagtc
gtcaacgtcaatccgctctacaccccgcgcgagcttgagcatcaactcaaggacagcggc
gccgaagccatcatcatcctggagaacttcgcgacgacgctgcagcaggtgctgcccaat
acgccggtcaagcacatcgtggtggccagcatgggcgacatgctcggcggccttaagggc
atgctggtgaattttgtcgtgcgcagcgtcaagaagatggtgccggcgtgggagcttccc
agttgcatccgcttcaatacggcgctgcaagagggcgccaagcagacgctcaagcccacc
tcggtcggccccgacgacgtggccttcctgcaatacacgggcggcacgacgggcgtgtcg
aagggcgcgacgctgctgcatcgaaatatcgtcgccaacgtgctccaatcggaagcgtgg
atgaacccggcgctcaccaagcccggccgcgacggccgcatgctggctgccgacgaagag
atcgtcaccatcaccgcgctgccgctgtatcacatcttcgcgctgacggtgtgctgcctg
ctgtcgatgcgcaagggcgggctggccgtgctgatcccgaacccgcgtgacattccgggc
ttcatcaaggtgctcaagcagtaccgcttccacatgttcccggccgtgaacacgctgtac
aacgcgctgctgaacaacccggaattcaaggatgtcgactgctccaacctgcgcgtggcc
aacggtggcggcatggcggtgcaggaagccgtggccaagaagtggctcgaggtgacgggg
tgcccgatcatcgagggctatggcctgtctgaaacctcgccgtcggccatctgcaacccg
accgataccgacaagttttcgggcaccgtcggcctgccgattccgggcactgaaatcgcc
attcgcgacgacgaaggccgcgatcagccgatcggccagccgggcgaaatctgcatccgc
ggcccgcaggtcatggctggttactggaagcgcccggacgagaccgccaaggtcatgtat
gccgacggcttcttcaagaccggcgacgtgggcgtaatggacgagcgcggttacaccaag
attgtcgatcgtaagaaggacatgatcctggtgtcgggcttcaacgtgtacccgaacgag
atcgaaggcgtcgtggcgatgtgcccgggcgtgctggaagtggctgccgtgggcgtgccc
gacgtccactcgggcgaggtggtgaagctgttcgtggtgcgccgcgacccgacactcacg
gaacagaagctgcaggagttctgcaaggaccagctcaccggttacaaacgccccaagttc
atcgagttccgcaacgagctgccgaagaccaacgtcggcaagatcctgcgccgcgaactg
cgcgatgaggcgatgaagaagcgtgcctga
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