Ralstonia pickettii 12J: Rpic_3129
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Entry
Rpic_3129 CDS
T00762
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rpi
Ralstonia pickettii 12J
Pathway
rpi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rpi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Rpic_3129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpi03400
]
Rpic_3129
Enzymes [BR:
rpi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Rpic_3129
DNA repair and recombination proteins [BR:
rpi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Rpic_3129
Prokaryotic type
Rpic_3129
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
HTH_21
Motif
Other DBs
NCBI-ProteinID:
ACD28252
UniProt:
B2UDL1
LinkDB
All DBs
Position
1:3276672..3277463
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AA seq
263 aa
AA seq
DB search
MTRRANPAQAALFDEPAVDAADVSFIPLAQQFDALPADWKAVLTPCIAQTNWPELCAFVD
GERAAGKPIFPTDVFRALHLTSVDDVRVVILGQDPYHGTGTVDGREIPQAHGLAFSVPAG
VRVPPSLRNIYKEIEAEFGCKLPGTSGNLEGWAQQGVLLLNTVLTVEQGQAASHAKRGWE
RITDCLLEQLARVGHKRVFMLWGSHAQAKRALLSDGHLVLEAPHPSPLSAHRGFLGCGHF
KTANDWLAAQRQPTIDWLKPQAA
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgacgcgccaatccggcgcaagccgccctcttcgatgaacccgcggtggacgcg
gccgacgtgagtttcatcccgctggcccagcagttcgacgccctccccgccgactggaag
gcggtcctcacgccctgcatcgcgcagaccaattggcctgaactatgtgcctttgtcgat
ggcgagcgcgcagcgggcaagccgatcttcccgacggatgtcttccgcgcgctgcacctg
acttcggtggacgatgtacgcgtcgtcatcctcggccaggacccgtatcacggcacaggc
accgtggatggccgcgagattccgcaggcgcatgggctggcgttttcagtgccggcgggt
gtgcgcgtgccgccaagcctgcgcaacatctacaaggaaatcgaagcggagttcggctgc
aagctgccaggcacctccggcaacctggagggctgggcacagcaaggcgtgctgctgctg
aacacggtgctcaccgtcgaacaaggccaggctgcgagccacgccaagcgcggctgggag
cgcatcaccgattgcctgctggagcaactcgcacgcgtcggccacaagcgcgtgttcatg
ctgtggggcagccacgcgcaggccaagcgcgcgctgctgtcggacgggcatctggtgctg
gaggcgccgcacccgtcgccgctgtcggcgcatcgcgggttcttgggatgcgggcatttc
aagacggcgaatgattggctggcggcgcagcgccaaccgaccatcgactggctgaaaccg
caggccgcttga
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