KEGG   Ralstonia pickettii 12J: Rpic_3172
Entry
Rpic_3172         CDS       T00762                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
rpi  Ralstonia pickettii 12J
Brite
KEGG Orthology (KO) [BR:rpi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rpi02048]
    Rpic_3172
Enzymes [BR:rpi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Rpic_3172
Prokaryotic defense system [BR:rpi02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Rpic_3172
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1R_D3-like ResIII DEAD T1RH-like_C fvmX1 FCD MapZ_EC1
Other DBs
NCBI-ProteinID: ACD28294
UniProt: B2UDQ3
LinkDB
Position
1:complement(3322510..3325497)
AA seq 995 aa
MFNEANTVEAYVRDLLVGPIKAVPANTVQEPQGSYGPSPKGIGWRYTAPADVPRQIQEVL
VEPWLRDALIRLNPEIASQPDRADEVLYKLRAIVLSVRSDGLIRANEEMTAWMRGERSMP
FGHNNEHVPVRLIDLDDLSQNHYIVTQQYTYRAGPTERRADLVLLVNGLPLVLIEAKTPV
KKCISWVDGAVQVHDDYEKFVPELFVCNVFSVATEGKAYHYGSIGLPVKDWGPWHLDGDG
HDGQHHPLKSLKLSTESMLRPHVVLDVLGSFTLFATNKKKQRIKIICRYQQFEAANKIVE
RVLAGYPRKGLIWHFQGSGKSLLMVFAAQKLRMHAGLKNPTVLIVVDRIDLDSQITGTFT
GADIPNLEKADSREKLQLLLAQDVRKIIITTIFKFGEATGSLNDRSNIIALVDEAHRTQE
GDLGRKMREALPNAFLFGLTGTPINRADRNTFYAFGAEEDEKGYMSRYGFEESIRDGATL
KLHFEPRLIDLHIDKAALDAAYKDLTGGLSDLDKDNLAKTAAKMAVLVKTPERIRKVCED
IVEHFQTKVEPNGFKGQIVTFDRESCLLFKAELDKLLPPEATDIVMSVQAGDKKEHPEYA
PYDRSRDEEERLLDRFRDPADPLKLIIVTAKLLTGFDAPILQAMYLDKPLRDHTLLQAIC
RVNRTYSEQKTHGLIVDYLGIFDDVAAALEFDDQSVKQVVSNIQELKDKLPDAMQKCLAF
FTGCDRTLQGYEGLIAAQQCLPNNEVRDNFAAEYSVLNKIWEALSPDTVLGPFEKDYKWL
SQVYQSVQPSSGHGKLIWHSLGAKTIELIHQNVHVDAVRDDLDTLVLDADLLEAVLSNPD
PKKAKEIEIKLNRRLAKHTGNPKFKQLSERLDALKDRFEAGQINSVEFLKELLQIAKEAL
QAEREVPPEEDEDRGKAALTELFNEVKTAETPILVERVVADIDEIVRLVRFPGWQGTQAG
EREVKKALRKALFKYKLHADEDLFEKAYSYIRQYY
NT seq 2988 nt   +upstreamnt  +downstreamnt
gtgtttaacgaagccaacaccgtcgaagcctacgtccgcgacctgctcgttggcccgatc
aaggcagtccctgccaacaccgttcaggaacctcaaggtagctacggccccagtcccaaa
ggcatcggctggcgctataccgcccctgctgacgtgccgagacagattcaggaagtgctg
gtcgagccctggctacgcgatgcgctgattcgcctgaaccccgaaattgccagtcagccg
gaccgcgccgatgaagtgctctacaagctgcgcgccatcgtgctgtcggtgcgctcggat
ggtctgatccgagccaacgaggaaatgactgcgtggatgcgtggtgagcgctcgatgccc
ttcggccacaacaacgagcatgtgccggtgcggctgatcgacttggatgacctatcgcag
aaccattacatcgtcacccagcagtacacctaccgtgctggccccaccgagcgccgcgcc
gatctggtgctcttggtcaacggactgccgctggttctgatcgaggcgaagacgccggtc
aagaagtgcatcagctgggtcgacggtgcggtacaggtgcacgacgactatgagaagttc
gtgccggagctcttcgtttgcaacgtgttctcggtggccactgagggtaaggcctaccac
tatggctccatcgggctgcctgtcaaggactggggcccttggcatctggatggagatggc
cacgatggtcagcaccatccgctgaaatcgctcaagctgtccaccgagagcatgctgcgc
ccgcatgtggtgctggatgttctgggcagcttcaccctgttcgccaccaacaagaaaaag
cagcgcatcaagatcatttgccgctaccagcagtttgaagcggccaacaagatcgtcgag
cgcgtgctggcgggttaccccaggaaaggcctgatctggcacttccagggttcgggaaag
tcactgctgatggtgtttgccgcgcagaagctgcgtatgcacgcaggattgaagaaccct
accgtgctgatcgtggtggatcggatcgacctcgacagccagatcactggcacgttcacc
ggggcggacattcccaatctggaaaaggcggacagccgcgagaagctgcagctgctgctg
gcgcaggacgtgcgcaagatcatcatcaccacgatcttcaaattcggtgaggccacgggc
agtctgaacgaccgcagcaacatcatcgctctggtcgacgaggcccaccgcacccaggaa
ggtgatctgggccgcaagatgcgtgaagccctgcctaacgcgtttctgttcggcctgacc
ggcacgccgatcaaccgcgcagaccgcaacaccttctacgcctttggtgccgaggaggac
gaaaagggttacatgagccgttatggcttcgaggaatcgatccgcgacggcgccacactg
aagctgcacttcgagccccggctgattgacttgcacatcgacaaggcggcactggatgcc
gcgtacaaagatctgaccggcggcctgtcggatctggacaaggacaacctcgccaagacc
gccgccaagatggccgtgctggtcaagacgcccgagcgtatccgcaaggtttgcgaggac
atcgtcgagcattttcagaccaaggtggagcccaacggctttaaagggcagatcgtcacc
ttcgacagggagtcctgcctgctgttcaaggccgagctggacaagctactgccgcccgag
gccacagacatcgtcatgtcggtgcaggcgggagacaagaaggaacacccagagtacgcg
ccctatgaccgttcacgcgatgaggaagaacggctgctagatcgcttccgcgacccggcc
gaccctctgaagctgatcatcgtcacggccaagcttcttaccggcttcgatgcgccgatc
ttgcaggccatgtacctggacaagccgctgcgtgaccacacgctgctgcaggccatctgc
cgcgtcaaccgtacctattccgagcagaagactcatggcctgatcgtggactacctaggc
atctttgatgacgtggcagcagcgctggaatttgacgaccagagcgtcaagcaggtggtc
agcaacatccaggagctgaaggacaagttgccagatgccatgcagaaatgcctggcgttc
ttcaccgggtgtgaccgcaccttgcagggctatgaaggcctgatcgctgcgcagcagtgc
ctgcccaacaacgaggtgcgagacaacttcgccgccgagtacagcgtgctcaacaagata
tgggaggctctgtcaccggacaccgtactgggccccttcgagaaggattacaagtggttg
tcacaggtgtaccagtcggtgcagccgtccagtggccacggcaaactgatctggcattcg
ctgggcgccaagaccattgaactgatccaccagaacgtgcatgtcgacgccgtgcgggat
gacctcgacactttggtgctggacgccgatctgctggaggcagtgctctcgaaccccgat
ccgaaaaaggccaaggaaatcgagatcaagctgaaccgacgtctggccaagcacaccggc
aatcctaagttcaagcagctttccgagcgactggatgctttgaaggaccgcttcgaggca
ggccagatcaacagcgtggagtttttgaaggagctgctgcagatcgccaaggaggcactg
caggccgagagggaagttccacccgaagaggacgaggatcgcggaaaggcagccttgact
gagctattcaacgaggtcaagacggccgaaacgccgatcttggtcgaacgcgtggttgcg
gacatcgacgagatcgtgcgcctggtgcgcttccccggctggcaaggcacgcaagccggc
gagcgggaagtaaagaaggcgctacgaaaggccctcttcaagtacaagctgcacgctgat
gaggatctcttcgaaaaggcgtacagctacatccggcagtactactaa

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