Ralstonia pickettii 12J: Rpic_3685
Help
Entry
Rpic_3685 CDS
T00762
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rpi
Ralstonia pickettii 12J
Pathway
rpi00061
Fatty acid biosynthesis
rpi00071
Fatty acid degradation
rpi01100
Metabolic pathways
rpi01212
Fatty acid metabolism
rpi02024
Quorum sensing
rpi04146
Peroxisome
Module
rpi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rpi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Rpic_3685
00071 Fatty acid degradation
Rpic_3685
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Rpic_3685
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rpic_3685
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rpi01004
]
Rpic_3685
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpi04147
]
Rpic_3685
Enzymes [BR:
rpi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Rpic_3685
Lipid biosynthesis proteins [BR:
rpi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Rpic_3685
Exosome [BR:
rpi04147
]
Exosomal proteins
Exosomal proteins of breast milk
Rpic_3685
Exosomal proteins of breast cancer cells
Rpic_3685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ACD28803
UniProt:
B2U7A3
LinkDB
All DBs
Position
1:3862171..3863859
Genome browser
AA seq
562 aa
AA seq
DB search
MTIQNREPVNYLAGEMPLHRYCAHHAQQTPERIALLWYGRTICWRELDQASTRLAVQLQR
LGVTRGDRVALFLHNCPQAIIAHLATAKLGGIVVPCGPLSRQHELRDQLTDSGAKILVAA
ADLMPIVEAARPGTSVMTVITTRYADLQPAQPACRKALAVPPELIAADASSAPPLKNKPG
AAQLDLMQLMAEPVDVAERNAVAAIQVSLDDVALMVYTSGTTGRPKGAMLTHRNALYKTA
VTVQVSGIHASDVMLAVAPLSHIAGMLMGMNVMLYSGATTILLYRFDPLAVLQAIDRYRV
TRWYSMTPMNLAVMAHPDAAQYRMESLVANPCTSFGVTLTEAIAEQWRAFAGPQCRIYEA
AYGLSETHTCDAITPADAPRWGWHGKIVPQTEVRIVDPHTGAELPPGQAGEITIRSPGVF
RGYWQRDEATRAVLHNGFLRTGDIGQVSPDGYLQWQGRIKEMIKVSGYSVFPEEVEALLS
RHPGIRQVAVTPIPDPEKGEVVCAHVVPMTGVTLSEAELIAWSRDNMAPYKVPRRVKFHE
ALPATATGKVLRRLLREDAIAA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccagaaccgcgaaccggtcaattatctggcaggcgagatgccgctgcaccgg
tattgcgcccaccatgcgcagcaaacgcccgagcgcatcgccctgttgtggtacggccgc
acgatctgctggcgcgagctggatcaggcctcgacgcggctggcggtgcagttgcagcgg
ctgggcgtgacgcgtggcgatcgcgttgcactgtttctgcacaactgcccgcaagccatc
attgcccatctggccacggccaagctgggtggcatcgtcgtgccgtgcgggccgctgtcg
cgtcaacacgagctgcgcgaccaactgaccgattctggcgccaagattctggtggccgcg
gcagacctgatgccgatcgtcgaggccgcccggcccggcacgtcggtcatgaccgtcatc
acgacgcgctatgccgatctgcagcccgcgcagccggcctgccgcaaggcgctggccgtg
ccgcccgaactgattgccgccgatgcctcgtcggcgccgccgctcaagaacaagccgggc
gccgcgcagcttgacctgatgcagctgatggctgagcccgtggatgtggctgagcgcaac
gccgtggcggctatccaggtgagcctggatgacgtcgcgctgatggtctacacctccggc
accaccggccgcccgaagggcgccatgctcacgcatcgcaacgcactgtacaagaccgcc
gtcacggtgcaggtcagcggcatccacgcctcggacgtgatgctggcggtggcgccgctg
tctcatatcgccggcatgctgatgggcatgaacgtgatgctgtattccggcgcgacgacc
atcctgctctatcggttcgatcccctggcggtgctgcaggccattgaccgctaccgcgtg
acacgctggtacagcatgacgccaatgaacctcgcggtcatggcgcatccggacgcggcg
cagtaccgcatggaatccttggtggccaacccgtgcaccagcttcggcgtcacgctgaca
gaagcgattgccgagcagtggcgtgcctttgccggcccgcagtgccgcatctacgaagcc
gcctatggcctgtcggaaacccacacctgcgacgccatcacgcccgccgatgccccgcgc
tggggttggcacggcaagatcgtcccgcagactgaggtgcgcatcgtcgacccgcatacc
ggcgctgaactgccacccggccaggctggcgaaatcaccatccgcagccccggcgtgttc
cgtggctactggcagcgagacgaggccacgcgcgccgtcctgcacaacggctttctgcgc
accggcgacatcggccaggtctcgcccgacggctaccttcaatggcagggccgcatcaag
gaaatgatcaaggtgtcgggctacagcgtgtttccggaagaggtcgaggcgctgctgtcg
cgccatccgggcatccgccaagtggccgtgacgcccatccccgatcccgaaaaaggcgag
gtcgtctgcgcgcacgtggtgccgatgaccggtgtaacgctctcggaagccgaactgatt
gcctggtcgcgcgacaacatggcgccgtataaggtgccgcggcgcgtgaagttccatgag
gcgctgccggctaccgcgacgggcaaggtgctgcgaaggttgttgcgcgaagacgccatc
gccgcgtga
DBGET
integrated database retrieval system
