Ralstonia pickettii 12J: Rpic_3748
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Entry
Rpic_3748 CDS
T00762
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rpi
Ralstonia pickettii 12J
Brite
KEGG Orthology (KO) [BR:
rpi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpi03032
]
Rpic_3748
03400 DNA repair and recombination proteins [BR:
rpi03400
]
Rpic_3748
Enzymes [BR:
rpi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Rpic_3748
DNA replication proteins [BR:
rpi03032
]
Prokaryotic type
DNA Topoisomerases
Rpic_3748
DNA repair and recombination proteins [BR:
rpi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Rpic_3748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ACD28866
UniProt:
B2U813
LinkDB
All DBs
Position
1:complement(3932615..3933706)
Genome browser
AA seq
363 aa
AA seq
DB search
MERVPKSAPAPVAASTTTLAEALPERLRYVDDTRPGYTRRRLRGRFVYFDTRGGRIRDPA
VIARINKLAIPPAYTDVWICPHAGGHLQATGRDARGRKQYRYHADWRAFRDADKYGRLLA
FGAVLPWVRGAITAHLEAPGLSREKMLATVVYLLDVTLVRVGNAAYARDNRSYGLTTLRN
RHVEVHGNTVRFQFRGKSGVEHDVSVSDPRLARIIRRCVDLPGQELFQYIDEAGERRAVD
STDVNAYLQEISGADFTAKDYRTWAGSVLALDLLRGRTPTNVTEARRQVVEVVAAVAQRL
GNTPAVCRKCYVHPAVVDAFLEGELEALPPTRARKGLRREEVALLRFLEHAAGAKGTGEK
KPA
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
gtggaacgcgttcccaagtctgcgcccgcgccggttgccgcaagcaccaccaccctcgcc
gaagcgctgcccgaacggctgcgctatgtggacgacacacgcccgggctacacccggcgt
cggctgcgcggccgcttcgtctatttcgacacgcgcggcgggcgcatccgcgacccggcg
gtgattgcgcgcatcaacaagctggcgatcccgccggcctataccgacgtctggatctgc
ccacacgcgggcggtcatctgcaggcgacggggcgcgacgcgcgtgggcgcaagcaatat
cgctatcacgccgactggcgcgcctttcgcgatgccgacaagtacgggcggctgctggcc
ttcggggcagtgctgccgtgggtgcgcggggcgatcaccgcccatttggaggcgccgggc
ctgtcgcgcgaaaagatgctggcgacggtggtctacctgctggacgtgacgctggtgcgc
gtgggcaacgcggcgtatgcgcgcgacaaccggtcctacgggctcacgacgttgcgcaat
cggcacgtcgaggtccacggcaacacggtgcgctttcagtttcgcggcaagagcggtgtg
gagcacgacgtgtcggtatcggacccgcgcctggcgcgcatcatccggcgctgcgtcgat
ctgccggggcaggaattgttccagtacatcgacgaagctggcgagcgccgtgcggtcgat
tccacagatgtgaatgcctacttacaggagatttccggcgcggatttcacggcgaaggac
taccgcacctgggccggcagcgtgctggcgctggatctgctgcgcgggcgcacgccgacg
aacgttaccgaggcgcgccggcaggtggtggaggttgttgctgccgtggcccagcgcctc
gggaacacaccggccgtctgccgcaagtgctatgtgcacccggccgtggtggacgcgttc
ctggagggcgaactggaagcattgcccccgacccgcgcgcgcaagggcctacgacgcgaa
gaggtggcgctgcttcgatttctcgagcacgccgccggcgcaaagggcacaggcgaaaaa
aagcccgcctga
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