Ralstonia pickettii 12J: Rpic_4248
Help
Entry
Rpic_4248 CDS
T00762
Name
(GenBank) type II and III secretion system protein
KO
K02280
pilus assembly protein CpaC
Organism
rpi
Ralstonia pickettii 12J
Pathway
rpi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rpi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Rpic_4248
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rpi02044
]
Rpic_4248
02035 Bacterial motility proteins [BR:
rpi02035
]
Rpic_4248
Secretion system [BR:
rpi02044
]
Type II secretion system
Tight adherence (Tad) export apparatus
Rpic_4248
Bacterial motility proteins [BR:
rpi02035
]
Pilus system
Pilus assembly proteins
Rpic_4248
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Secretin
T2SS-T3SS_pil_N
MDMPI_C
Motif
Other DBs
NCBI-ProteinID:
ACD29345
LinkDB
All DBs
Position
2:538068..539432
Genome browser
AA seq
454 aa
AA seq
DB search
MTDAAMVRGWMGGLALGCAAFVSSAFAETAPTGQTLHLLTGSQREIRLGKPLERIAIGNP
EIADALLLKGRGTATSVLIIAKKPGAANVMVWTQGGVATTYNVQVDAAAPVPGDPAVVAQ
GDTAVVSGQPKDVYALARARRSAAAASGAEKPKDGNVIDTTSMNVPGTVQVDVRVVEFSK
TVLKEAGFTFGRTRGGFDFRTFAPSSLSKVTFGSNGLSTESTMPIGSAFNLLVSSVSKGL
FADLSLLESNGMARVLAEPSLVALSGQSANFLAGGEIPIPVPQALGTTTIEYKPFGIGLT
VSPTILSENRIALKVAPEASDLDFSRGVTLNGATVPAIVTRRADTTVELGDGESFVIGGL
VSRSTLSNVDKVPFLGDVPIIGTFFKRLNYNQEERELVIIVTPHLVKPMARNAPIDKMLP
GQSSGRDRDTAGDPVWRPFALGVADPAAMPGFSK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgactgatgccgccatggttcgcggttggatgggcggactcgcgttgggctgcgccgcc
ttcgtgtcgagcgcatttgccgagacggcaccgaccggccagacgcttcatctgctgacg
ggaagccagcgcgagattcgcctgggcaaaccgctcgaacgcattgccatcggcaacccc
gagattgccgatgccctgttgctcaaggggcgaggtacggccacgagcgttttgatcatc
gccaagaagccgggtgcggccaacgtgatggtctggacgcaaggcggcgttgcgacgact
tacaacgtgcaggtggacgccgcggcgcctgtgccgggtgacccggcagtggttgcacag
ggcgatacggcggttgtttcaggtcagcccaaggatgtttacgcactggcccgtgcgcgc
cgttcggccgctgcagccagcggcgcagaaaaacctaaagatggcaacgtcatcgacacc
acctcgatgaacgtgccaggtacggtgcaagtcgacgtgcgggtagtggagttcagcaag
acggtgctcaaggaggccgggttcacgtttggtcgtacgcgcggcggtttcgatttccgg
acatttgcgccgtcgtcgctctccaaggtcacgtttggctccaacggtttgtctaccgaa
tccaccatgccgatcggttcggcgttcaacctgctggtctcctcggtcagcaagggcctc
tttgccgacctcagcttgctggaatcaaacggcatggcgcgtgtgctggccgagccaagc
ctggttgccctgtcaggccagagcgccaatttcctggccggtggcgagattccgattccc
gtgccccaagcgctgggtaccacgactatcgaatacaagccgttcggcatcgggctgacg
gtgtcgcccaccattctctcggagaaccgcatcgcgctgaaggtggcgcctgaagcgagc
gatctggatttcagccgaggcgtgacgctcaacggtgcgacggtgccggccatcgtcacg
cgccgtgccgatacaacagttgaacttggcgatggcgagagctttgtcatcggcgggctg
gtcagccggtccacgctgtccaacgtcgacaaagtgccgttcctgggtgacgtgccgatt
atcgggacgttcttcaagcgcctgaactacaaccaggaagagcgggaactggtgatcatc
gtcacgccgcatctggtcaagccgatggcacgcaatgcgccgatcgacaagatgctgccg
ggacagagtagcgggcgggatcgcgataccgcgggcgatcccgtgtggcggccgttcgcg
ctgggggtggcagatccggccgccatgcctgggttctcgaagtaa
DBGET
integrated database retrieval system
