Ralstonia pickettii DTP0602: N234_00015
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Entry
N234_00015 CDS
T03172
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
rpj
Ralstonia pickettii DTP0602
Brite
KEGG Orthology (KO) [BR:
rpj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpj03032
]
N234_00015 (gyrB)
03400 DNA repair and recombination proteins [BR:
rpj03400
]
N234_00015 (gyrB)
Enzymes [BR:
rpj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
N234_00015 (gyrB)
DNA replication proteins [BR:
rpj03032
]
Prokaryotic type
DNA Topoisomerases
N234_00015 (gyrB)
DNA repair and recombination proteins [BR:
rpj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
N234_00015 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-GeneID:
17099906
NCBI-ProteinID:
AGW88389
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All DBs
Position
1:3595..6120
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AA seq
841 aa
AA seq
DB search
MTEQQKPQQENTYGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSIDEAL
AGYCTEIQVTIHSDNSISIVDNGRGIPPLVKFDDKHEPKRSAAEIAMTELHAGGKFNQNS
YKVSGGLHGVGVSCVNALSKWLRLTVRRDGQVHLIEFAKGDVQNRIVETVTGPDGQPVEV
SPMKIIGATDKRGTEVHFLADEEIFTNVEFHYEILSKRIRELSFLNNGVHIKLVDQRTGK
EEDFAFSGGVKGFVEYINRSKSVLHPNIFYANTEKDGIGVEVAMQWNDGYNEQVLCFTNN
IPQRDGGTHLTGLRAAMTRIINKYIEENEVAKKAKVETTGDDMREGLSCVLSVKVPEPKF
SSQTKDKLVSSEVRLPVEELVSKALNDFLLETPGDAKIICGKIVDAARAREAARKAREMT
RRKGLMDGMGLPGKLADCQEKDPALSELFLVEGDSAGGSAKQGRDRKFQAILPLKGKILN
VERARFDKMLSSQEVLTLITALGTGIGKDDYNLDKLRYHRIIIMTDADVDGSHIRTLLLT
FFYRQMPDIIERGYVYIAQPPLYKIKHGKEERYIKDDVELNAYLLKLAMEKASLIRPDGT
EISGDALTELARQYQLTEGVIGRLSRVVDTDALRAIADGVTLDLDSAAAAEASAVALKAK
LAEMHAKTLIGAAVNDDGTADVYAQFDEKTDKHRLMIARRHHGNVRLSHLDADFVHGADY
AALSNAAKTFQGLTPEGTKVQRGEGDKLRDQTVNDFHGAMQWLLSEAERGVSRQRYKGLG
EMNPEQLFETTLDVTQRRLLKVQIEDAIAADQIFTTLMGDEVEPRRNFIESNALVARNID
V
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacagcagaaaccgcaacaggaaaacacctacggagcctcttcgatccagatc
ctggaaggcctggaggcggtacgcaagcgcccgggcatgtatatcggcgacacctccgac
ggcaccggcctgcaccacctcgtgttcgaggtgctggacaactccatcgacgaagcgctg
gccggctactgcaccgagatccaggtcaccatccacagcgacaactcgatctccatcgtc
gacaacggccgcggcatcccgcccctggtcaagttcgacgacaagcacgaacccaagcgc
agcgcggcggaaatcgccatgaccgagctgcacgccggcggcaagttcaaccagaacagc
tacaaggtatcgggcggcctgcacggcgtgggcgtgtcctgcgtgaacgcgctctccaag
tggctgcgcctgaccgtgcgccgcgacggccaggtccacctgatcgaattcgccaagggc
gacgtgcagaaccgcatcgtcgagaccgtgaccggccccgacggccagcccgttgaagtc
tcgccgatgaagatcatcggcgccaccgacaagcgtggcaccgaagtccacttcctggcc
gacgaagagatcttcaccaacgtcgaattccactacgagatcctctccaagcgcatccgc
gagctctcgttcctgaacaacggcgtccacatcaagctggtcgaccagcgcaccggcaag
gaagaagactttgccttctccggcggcgtgaagggctttgtcgaatacatcaaccgctcc
aagagcgtgctgcaccccaacatcttctacgccaataccgaaaaagacggtatcggcgtg
gaggtggccatgcagtggaacgacggctacaacgagcaggtgctctgcttcaccaacaac
atcccgcagcgtgacggcggcacccacctgaccggcctgcgcgccgcgatgacgcgcatc
atcaacaagtacatcgaagaaaacgaagtcgccaagaaagccaaggtggaaaccaccggc
gacgacatgcgcgaaggcctgtcctgcgtgctctccgtcaaggtgcccgagcccaagttc
agctcgcagaccaaggacaagctggtctcgtccgaagtgcgcctgcccgtggaagaactc
gtcagcaaggccctgaacgacttcctgctggaaaccccgggcgatgccaagatcatctgc
ggcaagatcgtcgacgccgcccgcgcccgggaggctgctcgcaaggcccgcgaaatgacg
cgccgcaaggggttgatggacggcatggggttgcccggcaagttggccgattgccaggaa
aaggatcctgcgctgtcggaactcttcctggtggagggtgactctgcaggtggctctgcc
aagcagggccgggaccgtaagttccaggccattctgccgctgaagggcaagattcttaac
gttgagcgtgcgcgctttgacaagatgctgtccagccaggaagtgctgacgctgattacc
gcgcttggtaccggcatcggcaaggatgactacaacctggacaagctgcgctaccaccgc
atcatcatcatgaccgatgctgacgtggatggatcgcacattcgtacgctgctgctgacg
ttcttctatcggcagatgcctgacattatcgagcgcgggtatgtctatatcgcgcagccg
ccgctgtacaagatcaagcatgggaaggaagagcggtacatcaaggatgatgttgagctc
aatgcttatctgttgaagttggcgatggagaaggcatcgttgattcgtccggatggcacg
gaaatcagcggtgatgcgctgactgagctggcgcgtcagtatcagctgactgaaggggtg
attgggcgtctgtcgcgtgttgttgatacggatgcgctgcgtgctattgcggatggcgtg
acgctggacctggatagcgctgctgcggcggaagcttcagctgtggcgttgaaggccaag
ctggctgagatgcatgccaagacgttgattggggcggctgttaatgatgacggtacggct
gatgtgtatgcgcagtttgatgagaagactgacaagcatcggctgatgattgcgcggcgt
catcatggcaacgtgcggttgtcccatttggatgcggattttgtgcatggggcggattac
gcggcgctgtccaatgccgccaagactttccaggggctgacgccggaagggactaaggtg
cagcggggtgaaggggataagctgcgggatcagacggtgaatgatttccacggtgccatg
cagtggctgttgtctgaggctgagcgtggggtttctcgtcagcgctataaggggctgggt
gagatgaatcctgagcagttgtttgagactacgcttgatgtcacccaacgccgcttgctg
aaggtgcagattgaggatgctattgcggcggatcagatctttaccacgctgatgggggat
gaggtggagccgcggcggaacttcattgagagtaatgcgttggtggcgcggaatattgat
gtttga
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