Ralstonia pickettii DTP0602: N234_01395
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Entry
N234_01395 CDS
T03172
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rpj
Ralstonia pickettii DTP0602
Pathway
rpj03420
Nucleotide excision repair
rpj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rpj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
N234_01395
03430 Mismatch repair
N234_01395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpj03400
]
N234_01395
Enzymes [BR:
rpj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
N234_01395
DNA repair and recombination proteins [BR:
rpj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
N234_01395
MMR (mismatch excision repair)
Other MMR factors
N234_01395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
HHH
RecR_HhH
AAA_11
AAA_12
HHH_5
Terminase_6N
DEAD
Motif
Other DBs
NCBI-GeneID:
17100183
NCBI-ProteinID:
AGW88663
LinkDB
All DBs
Position
1:complement(282353..284563)
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AA seq
736 aa
AA seq
DB search
MDIQLAPAFSQPFHPGGDPCACAGRALPDPRALPVSLDLAPASNLADLAAPEADAAPAYL
SRLNPEQRAAVQHGSGAPLLIIAGAGSGKTNTLAHRVAHLVLGGADPRRILLLTFSRRAA
AEMGRRVERIVDQALGTQTGAGRAALQWSGTFHAIGARLLREYAETLGLSPAFTISDRGD
SADLMHVVRHDLGLSETASRFPKKETCLAIYSRVVNTQAPLEDVLKQQFPRYAMWADALR
TLFAGYVEAKQKQHVLDYDDLLLYWAQAMAEPTIAQDMGARFDHILVDEYQDTNALQASI
LLAMRPDGRSLTVVGDDAQSIYAFRGATVRNILDFPQQFTPAAQQVTLSQNYRSTQPILQ
AANAVIGLAAERYTKDLWSDRASAEKPGVIVVNDEADQARYVVEQVLARREAGLALMAQA
VLFRAADHSAQVEIELARRNIPFVKFGGLKFLESTHVKDVLAVVRWLENPRDRMAGFRTL
QLLPGIGPKTAARVLDALALATEPLFSLEAFEPPPAAAPAWADLLALARALMAPTSPWPS
EFEQVLAWYAPHLERLHDDAAARQADLQQLERIAATYGARERFLTELTLDPPSASSDESG
VPSRDEDYLILSTIHSAKGQEWKAVYVLNAVDGCMPSDLATGTTEEIEEERRLMYVAMTR
AKDHLDIVVPQRFYVHQQVGFGDRHVYASRTRFLPNRVMPNFHSRAWPPPPMPGEGPVKP
ALAPVDLASRMRNMWR
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggatatacagttagcgccagctttttcccagcctttccatcctggtggcgatccgtgc
gcatgcgcgggccgcgccctgcccgaccctcgagccctgcctgtgtcactggatcttgcc
cctgcttcgaaccttgcggacctcgcggccccggaagccgatgcggcccccgcctacctc
tcccggctcaacccggagcagcgcgccgcggtccagcacggcagcggcgcgccgctgctg
atcatcgccggcgccggctcgggcaagaccaatacgctggcgcaccgcgtggcccacctg
gtgctgggcggcgccgacccgcgccgcatcctgctgctgaccttctcgcgccgcgccgcc
gccgagatgggccgccgggtcgaacgcatcgtcgaccaggcgctcggcacccagaccggc
gccgggcgtgccgcgctgcagtggtccggcaccttccacgccatcggcgcgcgcctgctg
cgcgaatacgccgagacgctgggcctgtcgcccgccttcaccatcagcgaccgtggcgat
tcggccgacctgatgcacgtggtgcgccacgacctgggcctgtccgaaaccgccagccgc
ttccccaagaaggaaacctgcctggcgatctactcgcgcgtggtcaacacgcaggcgccg
ctggaagacgtgctcaagcagcagttcccgcgctacgcgatgtgggccgatgcgctgcgc
acgctctttgccggctatgtcgaggccaagcagaagcagcacgtgctcgactacgacgac
ctgctgctgtactgggcgcaggcgatggccgagcccaccatcgcgcaggacatgggcgcg
cgtttcgaccatatcctggtcgacgaataccaggacaccaacgcgctgcaggcatcgatc
ctgctggccatgcgccccgatggccgcagcctgaccgtggtgggcgacgacgcgcagtcg
atctacgccttccgcggcgccaccgtgcgcaatatcctcgatttcccgcagcagttcacg
ccggcggcgcagcaggtcacgctatcgcagaactaccgttcgacgcagccgatcctgcag
gccgccaacgcggtgatcgggctggctgcggagcgctataccaaggatttgtggtccgac
cgcgcctcggcggaaaagcccggcgtgatcgtcgtcaacgatgaggccgaccaggcccgc
tacgtggtcgagcaggtgctggcgcggcgcgaggccgggctggcgctgatggcgcaggcg
gtgttgttccgtgccgccgaccacagcgcgcaggtcgagatcgagctggcgcggcgcaat
atcccgttcgtgaagttcggcgggctgaaattcctggaatcgacgcacgtgaaggatgtg
ctggccgtggtgcgctggctggaaaacccgcgcgaccgcatggcaggcttccgcacgctg
cagctgctgcccggcatcggccccaagaccgcggcacgcgtgctcgatgcgctggcgctg
gccaccgagccgctgttctcgctggaagcattcgagcccccgcctgctgccgcgccggcg
tgggccgacctgctggcgctggcgcgcgcgctgatggcgccgacctcgccatggccgtcg
gaattcgagcaggtgctggcctggtacgcgccgcacctggaacgcctgcatgacgatgcc
gccgcgcgccaggccgacctgcagcagctcgagcgcatcgccgccacctatggggcgcgt
gagcgcttcctgactgaattgacgctggatccgccaagcgcgtcgagtgatgagtctggc
gtgccctcgcgcgacgaggactacctgatcctgtcgaccatccactcggccaaggggcag
gagtggaaggcggtgtatgtgctcaatgcggtggacggctgcatgccgtccgacctggca
acgggtacgaccgaggagatagaggaagaacggcggctgatgtacgtggcgatgacgcgg
gccaaggaccatctcgacatcgtcgtgccgcagcgtttctatgtgcaccagcaggtgggc
tttggcgaccggcatgtttatgcgtcgcgcacgcgttttttgcctaatcgcgtgatgccg
aacttccacagccgtgcgtggccgccgccgccgatgccgggggaggggccggtcaagccg
gcgttggcgccggtggatctggctagcagaatgcggaatatgtggcgctga
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