Ralstonia pickettii DTP0602: N234_02415
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Entry
N234_02415 CDS
T03172
Name
(GenBank) Holliday junction resolvase
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
rpj
Ralstonia pickettii DTP0602
Pathway
rpj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
N234_02415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpj03400
]
N234_02415
Enzymes [BR:
rpj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
N234_02415
DNA repair and recombination proteins [BR:
rpj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
N234_02415
RecFOR pathway proteins
N234_02415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
DUF460
Motif
Other DBs
NCBI-GeneID:
17100388
NCBI-ProteinID:
AGW88867
LinkDB
All DBs
Position
1:complement(491476..492021)
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AA seq
181 aa
AA seq
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MRILGIDPGLRTTGFGVIEKHGNKLAYVASGTIRSDGNSPLPERLKTLYDGISEVSRTYA
PDCAAIEKVFVNVNPQSTLLLGQARGAAICGLVSYGLPVFEYTALQLKVAVVGYGRANKA
QVQEMVTRLLMLPGQPGSDAADALGVAICHANGGDTLGTLAGLAPDLVRKGMRVRRGRLI
G
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatcctaggcatcgaccccggcctgcgcaccaccggcttcggcgtgatcgagaag
cacggcaacaagcttgcctacgtggcctcgggcacgatcaggagcgacggcaattcgccg
ctgccggaacgactgaagacgctgtacgacggcatcagcgaagtgtcccgtacctacgcg
cccgactgcgcggcgatcgagaaggtgttcgtcaacgtcaacccgcaatcgacgctgctg
ctcggccaggcccgcggcgcggcgatctgcgggctggtcagttacgggttgccggtgttc
gagtacaccgcgctgcagctcaaggtggcggtggtcggctatggccgcgccaacaaggcg
caggttcaggagatggtgacgcggctgctgatgctgcccggccagcccggcagcgatgcg
gccgatgcgctcggcgtggcgatctgccatgccaatggcggcgataccctgggcacgctg
gcgggcctggcgcccgacctggtgcgcaagggcatgcgtgtgcgccgaggccggctgatc
ggctga
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