Ralstonia pickettii DTP0602: N234_05420
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Entry
N234_05420 CDS
T03172
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
rpj
Ralstonia pickettii DTP0602
Pathway
rpj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rpj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
N234_05420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpj03400
]
N234_05420
DNA repair and recombination proteins [BR:
rpj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
N234_05420
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
N234_05420
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_16
UB2H
Kinesin
FlaG
Motif
Other DBs
NCBI-GeneID:
17100989
NCBI-ProteinID:
AGW89460
LinkDB
All DBs
Position
1:1140476..1142560
Genome browser
AA seq
694 aa
AA seq
DB search
MSNLAEAAPALDEDKFVTFPGSPFQLYQPFPPAGDQPEAIRQLVEGVEDGLSFQTLLGVT
GSGKTFTMANVMARMGRPAIVFAPNKTLAAQLYSEFREFFPRNAVEYFVSYYDYYQPEAY
VPQRDLFIEKDSSINEHIEQMRLSATKSLLERRDTIIVATVSAIYGIGNPTEYHQMILTL
RAGDKISQRDVIARLIAMQYTRNETDFQRGTFRVRGDTIDIFPAEHAEMAVRLEMFDDEV
ESLHFFDPLTGRVRQKIPRFTVYPSSHYVTPRETVLRAIEAIKSELRDRLEFFHKENRLV
EAQRLEQRTRFDLEMLSELGFCKGIENYSRHLSGARPGEPPPTLVDYLPPDALMFLDESH
VLIGQLNGMYNGDRARKTTLVEYGFRLPSALDNRPLKFDEFERKMRQVMFVSATPAQFEQ
EHAGQVVEQVVRPTGLVDPIIMVRPATTQVDDLLSEIHLRVEAGERVLVTTLTKRMAEQL
TEFLSENGVKVRYLHSDIDTVERVEIIRDLRLGAFDVLVGINLLREGLDIPEVSLVAILD
ADKEGFLRAERSLIQTIGRAARNVNGTAILYADRMTDSMKKAIGETERRRAKQIAFNEAN
GITPRGVVKRIKDIIDGVYNVSDARAELQAAQEQARYEDMSEKQVSKEIKRLEKLMLDHA
RNLEFEQAAQVRDQLAKLKAQVFGASGDGALPPA
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccttgcagaagccgcgccggccctggacgaagacaaattcgtcacatttccc
ggctccccgttccagctctaccagccgttcccgccagccggcgaccagccggaggccatc
cggcaactggtggagggggtcgaggacggcctgtcgttccagacgctgctgggcgtgacg
gggtcgggcaagaccttcaccatggccaacgtgatggcccgcatgggacggccggcaatc
gtgttcgcgcccaacaagacgctggccgcccagctctattccgagttccgcgagttcttc
ccgcgtaacgcggtcgagtacttcgtcagctattacgactattaccagcctgaggcctac
gtcccgcagcgcgacctgtttatcgagaaggactcatcgatcaacgagcatatcgagcag
atgcggctgtcggcgaccaagagcctgctggagcgccgcgacacgatcatcgtggcaacc
gtctctgcgatctatggtatcggcaacccgaccgaataccaccagatgattctcaccttg
cgggccggcgacaagatcagccagcgcgacgtgatcgcgcgcctgatcgcgatgcagtac
acccgcaacgagaccgacttccagcgcggcaccttccgcgtgcgcggcgacaccatcgat
atcttcccggccgaacatgcggagatggcggtgcggctggagatgttcgacgacgaggtg
gagtcgctgcacttcttcgatccgctcacgggccgcgtgcgccagaagatcccgcgcttc
acggtctacccctcgagccactacgtgacgccgcgcgagaccgtgctgcgcgcgatcgag
gccatcaagtccgaactgcgcgatcggctggagttcttccacaaggaaaaccggctggtc
gaggcgcagcggctggagcagcgcacccgcttcgacctggaaatgctgtccgagctgggc
ttctgcaaaggcatcgagaactattcgcggcatctgtccggcgcgcgcccgggtgagccg
ccgccgacgctggtcgactacctcccgcccgacgccctgatgttcttggacgagtcgcac
gtgctgatcggccagctcaacggcatgtacaacggcgaccgcgcgcgcaagaccacgctg
gtggagtatggcttccggctgccgtcggcgctggacaaccggccgctgaagttcgacgag
ttcgagcgcaagatgcgccaggtgatgtttgtctcggccacgccggcgcagttcgagcag
gagcatgcggggcaggtggtggagcaggtggtgcggccgaccggcctggtcgatcccatc
atcatggtgcggccggccaccacgcaggtggatgacctgctgtccgagatccatctgcgc
gttgaagccggcgagcgcgtgctggtgaccacgctgaccaagcgcatggccgagcagctc
acggagttcctgtccgagaatggcgtcaaggtccgctatctgcactcggacatcgatacc
gtcgaacgcgtggagatcatccgcgacctgcgcctgggcgccttcgacgtgctggtgggc
atcaacctgctgcgcgagggtctggatatccccgaggtgtcactggtggcgatcctggac
gcggacaaggaaggcttcctgcgcgccgagcgctcgctgatccagaccatcggccgcgca
gcgcgcaacgtcaacggcaccgccatcctgtacgcggaccgcatgaccgactcgatgaag
aaggccatcggcgagaccgagcgccgccgcgccaagcagatcgccttcaacgaggccaac
ggcatcaccccgcgcggcgtggtcaagcgcatcaaggacatcatcgacggcgtctacaac
gtcagcgacgccagggccgagctgcaggccgcgcaggagcaggcgcgctacgaggacatg
agcgagaagcaggtctccaaggagatcaagcggctggaaaagctcatgctcgaccatgcc
cgcaacctggaattcgagcaggccgcgcaggtgcgcgaccagctggccaagctcaaggcg
caggtgttcggcgccagcggcgacggcgcgctgccgccggcctga
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