Ralstonia pickettii DTP0602: N234_08935
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Entry
N234_08935 CDS
T03172
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rpj
Ralstonia pickettii DTP0602
Pathway
rpj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rpj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N234_08935 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rpj03019
]
N234_08935 (groEL)
03110 Chaperones and folding catalysts [BR:
rpj03110
]
N234_08935 (groEL)
03029 Mitochondrial biogenesis [BR:
rpj03029
]
N234_08935 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpj04147
]
N234_08935 (groEL)
Enzymes [BR:
rpj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
N234_08935 (groEL)
Messenger RNA biogenesis [BR:
rpj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
N234_08935 (groEL)
Chaperones and folding catalysts [BR:
rpj03110
]
Heat shock proteins
HSP60 / Chaperonin
N234_08935 (groEL)
Mitochondrial biogenesis [BR:
rpj03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
N234_08935 (groEL)
Exosome [BR:
rpj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
N234_08935 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
N234_08935 (groEL)
Exosomal proteins of breast cancer cells
N234_08935 (groEL)
Exosomal proteins of colorectal cancer cells
N234_08935 (groEL)
Exosomal proteins of bladder cancer cells
N234_08935 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF2529
Motif
Other DBs
NCBI-GeneID:
17101697
NCBI-ProteinID:
AGW90153
LinkDB
All DBs
Position
1:1895754..1897388
Genome browser
AA seq
544 aa
AA seq
DB search
MAAKDVIFGDAARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEI
ELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVAAGMNPMDLKRGI
DKAVTAAVEELKKVSKPTTTSKEIAQVGAISANSDTSIGERIAEAMDKVGKEGVITVEDG
KSLADELEVVEGMQFDRGYLSPYFINNPEKQVVQLDSPFVLLFDKKVSNIRDLLPVLEQV
AKAGRPLLIIAEDVEGEALATLVVNNIRGILKTAAVKAPGFGDRRKAMLEDIAILTGGTV
IAEEIGLTLEKATLNDLGQAKRIEIGKENTIIIDGAGDAGAIEGRVKQIRAQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALL
RARAAISALTGENADQNAGIKIVLRAMEEPLRQIVLNAGEEASVVVAKVIEGKGNYGYNA
ASGEYGDLVEMGVLDPTKVTRTALQNAASVASLMLTTDCAVAESPKEESAPAMPGGMGGM
EGMM
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagacgtaattttcggcgacgccgcacgtgccaagatggtggaaggcgta
aacatcctcgccaacgcagtcaaggtgaccctgggcccgaagggccgtaacgtggtgctg
gagcgcagcttcggcggcccgaccgtgaccaaggacggcgtgtccgtggccaaggaaatc
gagctgaaggacaagctgcagaacatgggcgcccagatggtcaaggaagtggcttccaag
accagcgataacgccggtgacggtaccaccaccgcaaccgtgctggcccagtcgatcgtg
cgcgaaggcatgaagtacgttgccgccggcatgaacccgatggacctgaagcgcggcatc
gacaaggctgttaccgctgccgtggaagagctgaagaaggtcagcaagcccacgaccacc
agcaaggaaatcgcccaggttggcgcgatctcggccaacagcgacacctcgatcggtgag
cgcatcgccgaagccatggacaaggtcggcaaggaaggcgtgatcacggttgaagacggc
aagtcgctggccgacgagctggaagtcgtggaaggcatgcagttcgaccgcggctacctg
tcgccgtacttcatcaacaacccggaaaagcaagttgtccagctggacagcccgttcgtg
ctgctgttcgacaagaaggtctcgaacatccgcgacctgctgccggtgctggagcaagtg
gccaaggccggccgcccgctgctgatcatcgctgaagacgtcgaaggcgaagccctggcg
accctggtggtcaacaacatccgtggcatcctgaagaccgccgccgtcaaggccccgggc
ttcggcgaccgccgcaaggccatgctggaagacatcgccatcctgaccggcggcaccgtc
atcgctgaagaaatcggcctgacgctggaaaaggccaccctgaacgacctgggccaggcc
aagcgcatcgagatcggcaaggaaaacaccatcatcatcgatggcgccggcgacgcaggt
gcgatcgaaggccgcgtgaagcagatccgcgcccagatcgaagaagcgacctcggactac
gaccgtgaaaagctgcaagagcgcgtggccaagctggccggcggtgttgccgtgatcaag
gttggcgctgccaccgaagtcgaaatgaaggaaaagaaggcccgcgtggaagacgccctg
cacgccacccgcgctgcggtggaagaaggcatcgtccccggcggtggtgtggccctgctg
cgtgcccgcgctgcgatctcggcactgaccggcgaaaacgccgaccagaacgccggtatc
aagatcgtgctgcgcgccatggaagagccgctgcgccagatcgtgctgaacgccggtgaa
gaagcttcggtggtcgttgccaaggttatcgaaggcaagggcaactacggctacaacgcg
gcttcgggcgagtacggcgacctggtcgaaatgggcgtgctggacccgaccaaggtcacc
cgcaccgcactgcagaacgccgcttcggtggcttcgctgatgctgaccaccgactgcgcc
gttgccgaatcgccgaaggaggagtcggctccggcaatgccgggcggcatgggcggcatg
gaaggcatgatgtaa
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