Ralstonia pickettii DTP0602: N234_15560
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Entry
N234_15560 CDS
T03172
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rpj
Ralstonia pickettii DTP0602
Pathway
rpj03420
Nucleotide excision repair
rpj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rpj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
N234_15560 (uvrD)
03430 Mismatch repair
N234_15560 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpj03400
]
N234_15560 (uvrD)
Enzymes [BR:
rpj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
N234_15560 (uvrD)
DNA repair and recombination proteins [BR:
rpj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
N234_15560 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
N234_15560 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_12
AbiJ_NTD5
Motif
Other DBs
NCBI-GeneID:
17103018
NCBI-ProteinID:
AGW91445
LinkDB
All DBs
Position
1:complement(3341880..3344228)
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AA seq
782 aa
AA seq
DB search
MSDLLANLNAEQLAAVTLPDEPALILAGAGSGKTRVLTTRIAWLIQNGHVSPAGILAVTF
TNKAAKEMQTRLSAMLPINTRGMWIGTFHGLCNRLLRAHFRDAGLPQTFAILDSQDQLSA
IKRLLKSLNVDDEKYPAKNLQYFINNAKEQGLRPADVEANDDFNKRFVDLYAAYDTQCQR
EGVVDFAELLLRCYELLRYNDAIRQHYQHRFRHVLVDEFQDTNVLQYQWLKLLAGHGTQN
PAAVFAVGDDDQSIYAFRGANVGNMRDFEHEFRVRRMIKLEQNYRSHGHILDSANHLISH
NARRLGKNLRTDAGHGELVRVFHGGSDGQEAAWIIDEIRDQIAQGASRAEIAILYRSNAQ
SRVIEHALFSAGIPYRVYGGLRFFERAEIKHALAYMQLLENPRNDAAFGRVVNFPARGIG
ARSLEVLQDMARQYDCALAEAVAYVPGAAGSKLAAFTRLIERMRDETRRMTLAETVEYVI
NTSGLITHYQGEKEGQDRIENLQELVTAAQAFVVEEGYGLDALAAAIPVDRAAPTPALAE
GDQSQQVLDPEALPVVMTPLVAFLTHASLEAGDNQAQAGQDAVQMMTVHAAKGLEFDVVF
ITGLEEGLFPHENSMMDPDGLEEERRLMYVAITRARQRLFLSFAQSRMLHGQTRYHVRSR
FFEELPEASLKWLTPPAQSYGGVRKQERDSAWGKDWYRKPEDVPYTGTRPTGGMDNGNGY
ADAKREAGTGFRVGQSVFHNKFGEGVITALEGEGADARANIKFKRHGAKWLALSVAKLDA
ID
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacctgcttgccaacctgaacgccgaacaactagccgccgtgaccctgcctgac
gagccggcgctgatcctggcgggtgcgggcagcggcaagacccgcgtgctgaccacgcgc
atcgcctggctgatccagaacgggcatgtctcgccggccggcatcctggcggtgaccttt
accaacaaggccgctaaggaaatgcagacgcggctgtcggcgatgctgccgatcaacacc
cgcggcatgtggatcggcaccttccacggcctgtgcaaccgcttgctgcgcgcgcatttt
cgcgatgccggcctgccgcagacctttgccatcctggacagccaggaccagctctcggcg
ataaagcggctcttgaagtcgctcaacgtcgacgacgagaagtacccggccaagaacctg
cagtacttcatcaacaacgccaaggagcagggcctgcgcccggccgatgtcgaggccaac
gacgacttcaacaagcgcttcgtcgacctctacgccgcctacgacacgcagtgccagcgc
gagggcgtggtcgactttgccgagctgctgctgcgctgctacgagctgctgcgctacaac
gacgcgatccgccagcactaccagcaccgcttccgccatgtgctggtcgacgagttccag
gacaccaacgtgctgcagtaccagtggctcaagctgctggccggccatggcacgcagaac
cccgccgcggtctttgcggtgggcgacgacgaccagagcatctacgccttccgcggtgcc
aacgtcggcaatatgcgcgacttcgagcatgagttccgtgtgcgcaggatgatcaagctg
gagcagaactaccgctcgcacgggcatatcctggattcggccaaccacctgatttcgcac
aacgcgcgccgcctgggcaagaacctgcgcaccgacgccggccatggcgagctggtgcgg
gtgttccatggcggctcggacggccaggaggccgcctggatcatcgacgaaatccgtgac
cagatcgcgcagggcgccagccgcgccgagattgcgatcctgtaccgcagcaacgcgcag
tcgcgcgtgatcgagcatgcgctgttctccgcgggcatcccataccgcgtgtacggcggc
ctgcgcttcttcgagcgcgccgagatcaagcacgcgctggcttacatgcagctgctggag
aatccgcgcaacgatgccgcctttggccgcgtggtcaatttcccggcgcgcggcatcggc
gcgcgctcgcttgaagtgctgcaggacatggcgcgccagtacgactgcgcgctggccgag
gcggtggcctacgtgcccggcgccgccggcagcaagctagcggcgttcacgcggctgatc
gagcggatgcgcgacgagacccggcgcatgacgctggcggaaaccgtcgagtacgtgatc
aacaccagtggcctgatcacccactaccagggcgagaaggagggccaggaccgtatcgag
aacttgcaggaactggtgaccgcggcgcaggccttcgtggtcgaggagggctacgggctg
gatgcgctggccgccgcgatcccggtggaccgcgccgcgccgactccggcgctggccgaa
ggcgaccagtcgcaacaggtgctggatcccgaggcgctgccggtggtgatgacgccgctg
gtcgcgttcctgacgcatgcctcgctggaggccggcgacaaccaggcccaggccggccag
gacgcggtgcagatgatgaccgtgcacgcggccaaggggctggagttcgacgtggtcttt
atcaccgggctggaggaaggactgttcccgcacgagaacagcatgatggacccggacggc
ctggaggaagaacggcggctgatgtacgtggcaatcacgcgcgcgcgccagcgactgttc
ctgtcgttcgcgcaaagccgcatgctgcacggccagacgcgctaccacgtgcgctcgcgc
ttcttcgaggaactgcccgaggcctcgctcaaatggctcacgccgccggcgcagagctac
ggcggcgtgcgcaagcaggaacgggacagcgcgtggggcaaggactggtaccgcaagccc
gaagacgtgccctacaccggcacgcgcccgaccggcggcatggacaatggcaacgggtat
gccgatgccaagcgcgaggccggcaccggcttccgcgtgggtcagtcggtgttccacaac
aagttcggcgaaggcgtgatcaccgcgctggagggcgagggcgccgatgcgcgcgccaat
atcaagttcaagcgccacggcgccaagtggctggcgctgtcggtggcgaagctggacgcg
atcgactga
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