Ralstonia pickettii DTP0602: N234_17970
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Entry
N234_17970 CDS
T03172
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
rpj
Ralstonia pickettii DTP0602
Brite
KEGG Orthology (KO) [BR:
rpj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpj03016
]
N234_17970
Enzymes [BR:
rpj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
N234_17970
Transfer RNA biogenesis [BR:
rpj03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
N234_17970
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-GeneID:
17103503
NCBI-ProteinID:
AGW91926
LinkDB
All DBs
Position
1:complement(3859801..3861927)
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AA seq
708 aa
AA seq
DB search
MQLLFEEGGEIRAGTVLNQQGEAYQVELPAGKRTKVKSRDVLLQFAQPSAIELVRQTGDM
VAEIDLDFLWECAPEAEFGFAELAAEYYGAEPGAVQQAALAMALHGNPVYFRRKGRGRYQ
RAPEDQLKAALAALERKRQQALVQAEYEDQLKALTLPESFRNKVLQLLFKPDKNSLEFKA
MDAACTALGMTPMRLMVAAGGVASPRALHEAKFLAECFPKGTGFPDTDVPEPPADLPVAE
VEAFSIDDVTTTEIDDALSVTKLADGKLRIGIHIAAPALGIRRSEPLDAIARQRLSTVYF
PGDKITMLPDPVVERYTLQEGRVCPALSLYVTVDPSVWLITGSETRAEMVPIAANLRHNL
LDDVITEASLSQGTGDYPFRDALTQLWHFAGYLYDERQKARLASGLRPETHNRADFNFYL
DDQADGSQRVRIEQRKRGSPLDKIVAELMILANSTWGKLLADQGVPGIYRTQKAWGMHRT
RMQTYPAPHEGLGVAQYAWSTSPLRRYVDLVNQWQILAVAQHGVTAKLVAPFKPKDADLL
AAVADFEGTYAAYADHQSTMERYWCLRWLKQEKRERMMASVLKEGAVRFTEIPLVTRVPE
LAQAQRGTQVLLEIGETDEITLEVSCRVLEVFAGEGELPEEELESDEEAAEVSAEAAAEA
AAELAAEQAAEQAAGVSDEAPEEPAGADGNDENGEPSAQRDTGGPAAG
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgctgttcgaagaaggcggcgaaatccgcgccggcaccgtgctgaaccagcag
ggcgaggcctaccaggtggagctgccggccggcaagcgcaccaaggtcaagtcccgcgac
gtgctgctgcagtttgcgcagccgtcggcgatcgagctggtgcgccagaccggcgacatg
gtggcggagatcgacctggacttcctgtgggaatgcgcgcccgaggccgagttcggcttc
gccgagctggccgccgaatactacggcgccgaacccggcgcggtgcagcaggcggcgctg
gcgatggcgctgcacggcaacccggtgtacttccgccgcaaggggcgcggccgctaccag
cgcgcgcccgaagaccagctcaaggcggcgctggccgcgctcgagcgcaagcgccagcag
gcgctggtgcaggccgaatacgaagaccagctcaaggcgctgacgttgccggaatcgttc
cgcaacaaggtgctgcagctcctgttcaagccagacaagaacagcctggaattcaaggcc
atggacgcggcctgcaccgcgctgggcatgacgccgatgcggctgatggtcgccgccggc
ggcgtggccagcccgcgcgcgctgcatgaggccaagttcctggccgagtgcttccccaag
ggcaccggcttcccggataccgacgtgcccgagccgcccgccgacctgccggtggcggag
gtggaagcgttttcgatcgacgacgtcaccaccaccgagatcgacgacgcgctgtcggtg
acgaagctggccgacggcaagctgcgcatcggcatccatatcgccgcgcccgcgctgggc
atccgccgtagcgagccgctcgacgcgatcgcacgccagcggttgtccacggtctacttc
ccgggcgacaagatcaccatgctgcccgacccggtggtggagcgctacacgctgcaggaa
ggccgcgtatgcccggcactgtcgctgtacgtgacggtggacccgagcgtgtggctcatc
accggcagcgagacccgcgccgagatggtgccgatcgccgccaacctgcgccacaacctg
ctggacgacgtcatcaccgaggcctcgctctcacagggcaccggcgactacccgttccgc
gacgcgctgacgcagctctggcactttgccggctacctgtacgacgagcgccagaaggcg
cgcctggccagcggcctgcgtcccgagacgcacaaccgcgccgacttcaacttctacctc
gacgaccaggccgacggcagccagcgcgtgcgcatcgagcagcgcaagcgcggctcgccg
ctggacaagatcgtggccgagctgatgatcctggccaacagcacctggggcaagctgctg
gccgaccagggcgtgccgggcatctaccgcacgcagaaggcgtggggcatgcaccgcacc
cgcatgcagacctatccggcgccgcacgaggggctgggcgtggcgcagtacgcgtggagc
acctcgccgctgcgccgctatgtcgacctggtcaaccagtggcagatcctggcggtggcc
cagcacggcgtgaccgccaagctggtggcgccgttcaagcccaaggacgccgacctgctg
gccgcggtggccgacttcgaaggcacctatgccgcctatgccgaccaccagtcgaccatg
gagcgctactggtgcctgcgctggctcaagcaggaaaagcgcgagcgcatgatggcctcg
gtgctcaaggaaggcgcggtgcgcttcaccgagatcccgctggtcacgcgcgtgcccgag
ctggcccaggcgcagcgcggcacccaggtgctgctggagatcggcgagaccgacgagatc
acgctggaggtgtcgtgccgcgtgctggaagtctttgccggagaaggcgagttgcccgag
gaagagctggaaagcgacgaggaagccgctgaagtgtcggccgaagccgctgccgaggcc
gcggcggagctggcggccgagcaagccgcggagcaggccgccggggtgtcggacgaggcg
ccggaggaacccgcgggcgcggacggcaatgacgagaacggcgagccgtcggcccagcgc
gacaccggcggcccggcggcgggctga
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