Ralstonia pickettii DTP0602: N234_19570
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Entry
N234_19570 CDS
T03172
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
rpj
Ralstonia pickettii DTP0602
Pathway
rpj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rpj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
N234_19570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rpj03021
]
N234_19570
03400 DNA repair and recombination proteins [BR:
rpj03400
]
N234_19570
Enzymes [BR:
rpj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
N234_19570
Transcription machinery [BR:
rpj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
N234_19570
DNA repair and recombination proteins [BR:
rpj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
N234_19570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Apocytochr_F_C
Peptidase_M23
Motif
Other DBs
NCBI-GeneID:
17103822
NCBI-ProteinID:
AGW92238
LinkDB
All DBs
Position
1:complement(4204399..4208646)
Genome browser
AA seq
1415 aa
AA seq
DB search
MKALLDLFKQVQQEEQFDAIKIGLASPEKIRSWSYGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELAAPTAHIWFLKSL
PSRLGMVLDMTLRDIERVLYFEAFVVLEPGMTPLKKSQIMSEDDYLAKCDEYGEGEFVAM
MGAEGIRELLRGIDIEKQIEQIRAELQATGSEAKIKKFAKRLKVLEAFQRSGIKPEWMIL
EVLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRML
QEAVDSLLDNGRRGKAMTGANKRPLKSLAEMIKGKGGRFRQNLLGKRVDYSGRSVIVVGP
TLKLHQCGLPKLMALELFKPFIFHKLETMGIATTIKAAKKEVESQTPVVWDILEEVIREH
PVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQME
ARTLMLASNNVLFPANGDPSIVPSQDVVLGLYYTTRDKINGRGEGMTFADISEVIRAYEN
KEVELASRVNVRITEYELVDKDAEGDARFAPKITLQATTVGRAILSEILPKGLPFSVLNK
PLKKKEISRLINTAFRKCGLRETVIFADKLLQSGFRLATRAGISIAIDDMLVPPQKEKII
AEASAKVKEYDKQYMSGLVTDQERYNNVVDIWGAAGDQVGKAMMEQLQHEDVVDREGKTV
KQESFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFI
STHGARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSNGVAMKALVEGGEVIEA
LRDRILGRVTVADVVNPETQETAIETGTLLDEDLVELIDAIGVDEVKVRTPLSCDTRYGL
CGKCYGRDLGRGVLVNSGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKA
TGTVRFTATMRYVTNAKGELIVISRSGEALITDDHGRERERHKIPYGATLLVQDGQAIKA
GTQLATWDALTRPIVSEYTGTTKFENVEEGVTVAKQMDEVTGLSTLVVIDAKRRTAATKG
IRPQVKLLDASGQEVKIPGTDHSVTIGFQVGALITVKDGQQVHVGEVLARIPTESQKTRD
ITGGLPRVAELFEARSPKDAAVLAEVTGTTSFGKDTKGKQRLVITDLDGNAHEFLIAKEK
QVLVHDGQVVNKGEMIVEGPADPHDILRLKGIEELAHYIVDEVQDVYRLQGVKINDKHIE
VIVRQMLRRVQIADVGDTKFIPGEQVERSELLDENDRVIAEGKRPATYENLLLGITKASL
STDSFISAASFQETTRVLTEAAIMGKTDDLRGLKENVIVGRLIPAGTGLAYHRARKAREA
SERERAQAIAEEEQSLFIEPAPVVQATTEGEGDNV
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcattgctcgatctctttaagcaggttcagcaggaagagcagttcgacgcgatc
aagatcggcctggcctcgcccgagaagatccgttcgtggtcgtacggcgaagtgaagaag
ccggaaacgatcaactaccgtaccttcaagccggagcgcgacggcctgttctgcgccaag
atctttggcccgatcaaggactacgagtgcctgtgcggcaagtacaagcgcctgaagcac
cgtggcgtgatctgcgagaagtgcggcgttgaagtgacgctggccaaggtgcgccgcgag
cgcatgggccacatcgaactggccgcgccgaccgcgcacatctggttcctgaagtcgctg
ccgtcgcgtctgggcatggtgctcgacatgacgctgcgcgacatcgagcgcgtgctgtac
tttgaagcattcgtggtgctcgaacccggcatgaccccgctcaagaagagccagatcatg
tcggaggacgactacctggcgaagtgcgacgagtacggcgagggcgagttcgtcgccatg
atgggtgccgagggcatccgtgaactgctgcgcggcatcgacatcgagaagcagatcgaa
cagatccgcgccgagctgcaggccaccggttccgaagccaagatcaagaagtttgccaag
cgcctgaaggtgctcgaggccttccagcgttcgggcatcaagcccgagtggatgatcctc
gaagtgctgccggtgctgccgcccgagctgcgtccgctggtgcccctggacggcggccgc
tttgcgacctcggacctgaacgacctgtatcgccgcgtcatcaaccgtaacaaccgcctg
aagcgtctgctggaactgaaggcgcctgaaatcatcgtgcgcaacgaaaagcgcatgctg
caggaagcagttgactcgctgctggacaacggccgtcgcggcaaggcgatgaccggcgcc
aacaagcgtccgctgaagtccctggccgaaatgatcaagggcaagggcggccgtttccgt
cagaacctgctgggcaagcgcgtcgactactcgggccgttcggtcatcgtggtgggcccg
acgctgaagctgcaccagtgcggcctgcccaagctgatggcgctcgagctgttcaagccc
ttcattttccacaagctggaaacgatgggcatcgccaccaccatcaaggcggcgaagaag
gaagtcgaaagccagacgccggtggtgtgggacatcctcgaagaggtgatccgcgagcac
ccggtgatgctgaaccgtgcgccgacgctgcaccgcctgggtatccaggcgttcgagccg
gtgctgatcgaaggcaaggccatccagctgcacccgctggtctgcgcggcgttcaacgcc
gacttcgacggtgaccagatggctgtccacgtcccgctgtcgctggaagcgcagatggaa
gcccgcacgctgatgctggcctccaacaacgtgctgttcccggccaacggcgacccgtcg
atcgtcccgtcgcaagacgtggtgctgggtctgtactacacgacccgcgacaagatcaac
ggccgcggcgagggcatgaccttcgccgacatcagcgaagtgatccgcgcctacgagaac
aaggaagtcgagctggcttcccgcgtgaacgtgcgtatcaccgagtatgagctggtcgac
aaggacgccgagggcgacgcccgtttcgcacccaagatcacgctgcaggccaccacggtc
ggccgcgcgatcctgtccgagattctgccgaaggggctgccgttctcggtgctgaacaag
ccgctcaagaagaaggaaatctcgcgcctgatcaacaccgcgttccgcaagtgcggcctg
cgcgagaccgtgatcttcgccgacaagctgctgcagtcgggcttccgcctggcaacccgc
gccggtatctcgatcgccatcgacgacatgctggtgccgccgcagaaggaaaagatcatc
gccgaggcctcggccaaggtgaaggaatacgacaagcagtacatgtcgggcctggtgacc
gaccaggagcgctacaacaacgtcgtggacatctggggcgccgccggcgaccaggtgggc
aaggcgatgatggagcagctccagcacgaagacgtggtcgaccgcgaaggcaagaccgtg
aagcaagagtcgttcaactccatctacatgatggccgactcgggcgcacggggctcggca
gcgcagatccgccagctggcggggatgcgtggcctgatggccaagccggacggctcgatc
attgaaacgccgattacggcgaacttccgtgaaggcctgaacgttctgcagtacttcatc
tcgacccacggcgcccgtaagggcctggccgatacggcactgaagaccgcgaactcgggt
tacctgactcgtcgtctggtcgacgtgacgcaggatctggtcgtggtggaagacgattgc
ggcacctccaacggcgtggccatgaaggccctggtcgaaggcggtgaagtgatcgaagcc
ctgcgcgaccgtatcctcggccgtgtgaccgtggccgatgtggtgaacccggaaacccag
gaaaccgcgatcgaaactggcacgctgctggacgaagacctggtcgagctgatcgacgcg
atcggcgtggacgaagtcaaggtccgcaccccgctgtcgtgcgacacacgctacggcctg
tgcggcaagtgctatggccgcgacctgggccgcggcgtactggtgaactccggcgaagcg
gttggcgtgattgccgcccagtcgattggtgagccgggcacgcagctgaccatgcgtacg
ttccacatcggtggtgcggcatcgcgtgcggcagtggcatcgagcgtggaagccaaggca
accggtaccgtgcgtttcacggcgactatgcgttacgtcaccaatgcgaagggcgaactg
atcgtcatctcgcgttcgggcgaggcgctgatcaccgacgaccacggccgcgagcgcgaa
cgccacaagatcccgtacggcgccacgctgctggtgcaggacggccaggccatcaaggct
ggcacgcagctggccacgtgggacgcgctgactcgcccgatcgtttcggaatacaccggt
acgaccaagttcgaaaacgtcgaagaaggcgtgaccgtcgccaagcagatggacgaagtg
acgggcctgtcgaccctggtggtgatcgacgccaagcgccgcacggctgcaaccaagggc
atccgcccgcaggtgaagctgctcgacgccagcggccaggaagtgaagatcccgggcacg
gaccactccgtgaccatcggcttccaggtcggcgcgctgattaccgtgaaggacggccag
caggtgcacgtgggtgaagtgctcgcgcgtatcccgaccgaatcgcagaagacccgcgac
attaccggtggtctgccgcgtgtggccgagctgttcgaagcgcgttcgccgaaggacgcc
gccgtgctggcggaagtcaccggcacgacctcgttcggcaaggacaccaagggcaagcag
cgcctggtcattaccgacctggacggcaatgcccacgagttcctgatcgcgaaggaaaag
caggtgctggtgcacgacggccaagtggtgaacaagggcgaaatgatcgtggaaggtccg
gcggatccgcacgacatcctgcgcctgaagggcatcgaagagctggcgcactacatcgtg
gacgaagtccaggacgtgtaccgtctgcagggcgtgaagatcaacgacaagcacatcgaa
gtgattgttcgtcagatgctgcgccgcgtgcagatcgccgatgtcggcgacaccaagttc
attccgggtgaacaggtggagcgttcggaactgctcgacgagaacgaccgcgtgatcgcc
gaaggcaagcgtccggctacctacgagaacctgctgctgggtattaccaaggcgtcgctg
tcgaccgacagcttcatctcggcggcatcgttccaggaaaccacgcgcgtgctgaccgaa
gccgcgatcatgggcaagaccgacgacctgcgtggtctgaaggaaaacgtgatcgtcggc
cgcctgatcccggccggtaccggcctggcctaccatcgtgcccgcaaggcgcgcgaggcc
tccgagcgcgaacgcgcccaggcgatcgccgaagaagagcagtcgctcttcatcgagccg
gcgccggtggtgcaggcgacgaccgaaggcgaaggcgacaacgtctga
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integrated database retrieval system
