Ralstonia pickettii DTP0602: N234_21845
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Entry
N234_21845 CDS
T03172
Name
(GenBank) DNA repair exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
rpj
Ralstonia pickettii DTP0602
Brite
KEGG Orthology (KO) [BR:
rpj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpj03400
]
N234_21845
DNA repair and recombination proteins [BR:
rpj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
N234_21845
Archaeal homologous recombinant proteins
N234_21845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_29
SMC_N
TsaE
NACHT
ABC_tran
nSTAND3
cobW
AAA
GTP_EFTU
AAA_21
AAA_22
Motif
Other DBs
NCBI-GeneID:
17104272
NCBI-ProteinID:
AGW92668
LinkDB
All DBs
Position
2:194186..197251
Genome browser
AA seq
1021 aa
AA seq
DB search
MRPLHLTLQAFGPFAATEQVDFTRLGDQAFFLIHGPTGAGKTTLLDAICFALYGDTSGGE
RSAQAMRSANAAPGLRTEVTLEFSLGAQRWRVVRSPAQERPKQRGEGWVTEAAKAQLDLH
DGNGWVSKASQPGKVSDAIRDLLGFDSAQFRQVIVLPQGRFRELLTASSQARQAILERLF
RTELYRRVEELLKAQAAEIRRDAERIGIQREEALRQAGVESAQALTDGIAALQAELLALH
GQEQGARTVLATAQTTLGAAEQVAARLQERQQAQAAHAALLARQPSIEDERARLHAAQRA
ARVRPALQQWQTAQRDQTAAGAALAQAGEQAARTAQQAEQVAAALQAETARAGERQAAQR
RVSQLEAMLPRAQQLGALRAALQAAEGKQAATATARERATAQLAARQADAVAAESALAQA
QLAGAQAQATQLQLAALQERARQFSRHAQAAGVLTAAMNQAADTEAAAQQALRARDRSRG
TLAEAESLWRAGQAARLAASLASGDACPVCGSTAHPTPALHVAAPLSDEALEQTRQAALE
AESRAVRCAGQHQAAQAAIAQARERLDDIAQALGDVSDEAARHLKSEIAALEGALAEGKQ
AAASVAQREAAIVATRSARDAAEAASRDAATAAEAAAQALARCQGEWQAASAQVPEDSRD
PAALVEALRQAQAMLATLERALAAAQAAERQAAADAAGAQAALASARQVQSQAATRLADA
DSVLAQALAQEAFADVQAHAANSLPDDAMQAIDATLRTFDAQLAAAADRRERAEAAAQSL
DAPDLDGLREAREAAAAAVEALVRQQAERGRSRDALQQCHQRLQQLDAQGRDIEARYAVL
GRLAEVANGNNPRRMTFQRFVLATLLDEVLEAASARLLAMSRGRYVLQRVRELGDQRSAG
GLDIEVFDYDTGAPRPANTLSGGEGFLASLSLALGLADVVQSRAGGIQLDTLFVDEGFGT
LDPESLDFAIRTLLDLQQAGRLVGIISHVTELRERIDVRLEVRPGVGGSRTVLTGATAAA
L
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgagaccgctgcatctgaccctgcaggccttcgggccttttgccgcgaccgagcaggtt
gacttcacgcggctgggcgaccaggccttcttcctgatccacggtcccaccggcgccggc
aagaccacgctgctcgacgcgatttgctttgcgctgtacggcgatacctccggcggcgaa
cgcagcgcgcaggcgatgcgcagcgccaatgcggcgccaggattgcggaccgaggtcacg
ctggagttcagcctcggcgcgcagcgctggcgcgtggtccgttcgcccgcgcaggagcgg
cccaagcagcgcggcgaaggctgggtgaccgaggccgccaaggcgcagctggacctgcat
gacggcaatggctgggtcagcaaggccagccagccgggcaaggtcagcgacgcgatccgc
gatcttctgggcttcgacagcgcgcagttccgccaggtgatcgtgctgccgcaagggcgt
ttccgtgaactgctgacggccagttcgcaggcacggcaggcgatcctggagcgcttgttc
cgcaccgagctgtatcgccgcgtagaagagttgctgaaggcgcaagccgccgagatccgc
cgcgatgccgaacgcatcggcatccagcgcgaggaagcactgcgacaggccggcgtggag
tccgcgcaggcgctgaccgatggcatcgccgcgctgcaggcggaactgctggcgctgcac
gggcaggagcagggcgcgcgcactgtgctggccaccgcgcagacgacgctgggtgccgcc
gagcaggtggcggcgcgcctgcaggagcgccagcaggcgcaggccgcgcatgcggcgctg
ctggcacgccagccgtcgatcgaagacgagcgcgcacgcctgcatgccgcccaacgtgcc
gcgcgcgtcaggccggcgctgcagcaatggcagacggcgcagcgtgaccagacggcggcc
ggcgcggcgctggcacaggccggcgaacaggcggcccgtaccgcgcaacaggcggaacag
gtcgcagccgcgttgcaggcggaaacggcgcgtgccggcgagcgccaggccgcgcagcgg
cgcgtctcgcaactggaagccatgttgccgcgcgcgcagcagctcggcgccttgcgggcc
gcattgcaggccgccgaaggcaaacaggccgccacggctaccgcgcgggaacgggctacg
gcacagcttgccgcacgccaggccgacgccgtcgccgccgagtccgcgctcgcccaggcg
cagcttgccggcgcgcaggcgcaggcgacgcagcttcagttggccgcgctgcaggaacgg
gcgcggcagttcagccgccacgcgcaggccgccggggtgctgaccgccgcgatgaaccag
gcggccgataccgaagcggcggcgcagcaggcgctgcgcgcccgcgaccgcagccgcggc
acgctcgcggaagcggaatccctctggcgcgccggacaggccgcgcgcctcgccgctagc
ctggcgtcgggcgatgcctgtccggtatgcggcagcactgcgcatccgacgccggcgctg
catgtggccgcgccgctatcggacgaagcgctggaacagacccgccaggccgcgctggaa
gccgagtcccgggcggtgcgctgcgccggccagcatcaggccgcgcaggcagccatcgcg
caggcgcgcgagcggctggacgacatcgcgcaggcattgggcgatgtgtcggacgaggcc
gcgcgccacctgaagtcggagatcgccgccctggaaggcgcgctggccgaaggcaaacag
gccgcggcaagcgtggcgcaacgcgaagccgccatcgttgccacccgcagcgcacgcgat
gccgcggaagccgccagccgtgatgccgccacggcagccgaagccgccgcacaggcgctg
gcccgctgccagggcgaatggcaggccgccagcgcgcaagtcccggaagattcgcgcgac
ccggcggcgctcgttgaggccttgcgccaggcccaggccatgctcgccacgctggaacgc
gcgctggccgccgcgcaggcggccgagcgccaggccgccgccgatgccgcgggtgcgcag
gcagcgctggcgtcggcccgtcaggtgcagtcgcaggccgcgacccggctcgccgatgcc
gacagcgtgctggcgcaagcgctggcacaggaagcctttgccgacgtgcaggcgcatgcc
gccaacagcctgcccgacgatgcgatgcaggcgattgacgccacgctgcgcaccttcgac
gcccagcttgccgccgccgcggaccggcgcgagcgcgccgaggccgcggcgcaatcgctc
gatgcgccggacctcgatggcctgcgtgaggcgagggaggcggcagccgcggcagtggaa
gcactggtccgccagcaagccgagcgcggccgttcgcgcgacgccttgcagcaatgccac
cagcgcctgcagcagctagacgcgcagggccgcgacatcgaggcccgctatgcggtcctg
ggccggctggccgaagtcgccaacggcaacaacccgcgccgcatgacgttccagcgcttc
gtgctggcgacgctgctcgacgaggtgctcgaagccgcgtcggcgcggctgctggcgatg
agccgcggccgctatgtgctgcagcgcgtgcgcgaactgggcgaccagcgcagcgcgggc
gggctcgatatcgaagtgttcgactacgacaccggcgcaccgcgcccggccaacacgttg
tcgggcggcgaaggtttcctggcttcgctgtcgctggcgctggggttggccgacgtggtg
cagtcgcgcgcgggcggcatccagctcgatacgttgtttgtggatgagggtttcggcacg
ctcgatcccgagagcctggactttgcgatccgcacgttgctggacttgcagcaggcgggg
cggctggtggggatcatttctcacgttaccgaactgcgggaacgcattgacgtgcggctg
gaagtgaggccgggtgtgggtgggagccggacggtgttgacgggcgcaactgccgcagcg
ttataa
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