Ralstonia pickettii DTP0602: N234_26915
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Entry
N234_26915 CDS
T03172
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehdyrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
rpj
Ralstonia pickettii DTP0602
Pathway
rpj00250
Alanine, aspartate and glutamate metabolism
rpj00310
Lysine degradation
rpj00350
Tyrosine metabolism
rpj00650
Butanoate metabolism
rpj00760
Nicotinate and nicotinamide metabolism
rpj01100
Metabolic pathways
rpj01120
Microbial metabolism in diverse environments
Module
rpj_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
rpj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
N234_26915 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
N234_26915 (gabD)
00310 Lysine degradation
N234_26915 (gabD)
00350 Tyrosine metabolism
N234_26915 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
N234_26915 (gabD)
Enzymes [BR:
rpj01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
N234_26915 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
N234_26915 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
N234_26915 (gabD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aldedh
DUF1487
Motif
Other DBs
NCBI-GeneID:
17105282
NCBI-ProteinID:
AGW93669
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All DBs
Position
2:1271320..1272828
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AA seq
502 aa
AA seq
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MPHLTSFLLTPMALSLADAALLRSQNLIDHQWRDAGLGRRLPVTDPATGETFASVADSDA
GDARLAVDAAAAAFPAWSRRPARERAQLIKRWHALILAHQDDLARIISTEQGKPIHEARG
EVQYGASYVEWFAEEATRICGDIVAEAVPGRKLLVLKEPVGVVAAITPWNFPLAMIARKI
APALAAGCTVVAKPAEDTPLTALALAWLAQQAGIPAGVLNMVTASREHTPDVVDAWLADS
RVRKITFTGSTPVGKHLARESAATLKKLSLELGGNAPFIVFEDADLDAAVDGLMASKFRN
GGQTCVCPNRVYVHDAVHDAFVERLAQRVGALHVGPATEEGAQIGPMINARAVDKIARHV
EDAVARGARVVTGGKRVRTADGPHYYAPTVLIDATPAMELSCEETFGPVAPIFRFRDETD
VIRDANDTPFGLAAYFYSNDIRRIWRVAQALETGMVGINEGAIAAEAAPFGGVKESGYGR
EGSRHGLDDYMHTKYLCQGQLG
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
ttgccgcacctcacctcctttctgcttacaccgatggccctgtctcttgccgatgctgcg
ctgctgcgcagccagaaccttattgaccaccaatggcgcgatgccggccttggccgccgc
ctgccggtgaccgaccccgccaccggcgagacctttgccagcgtggccgacagcgacgcg
ggcgatgcgcgtctcgcggtcgatgctgctgcggcggcgtttccggcatggagccgccgc
cccgcacgcgagcgcgcgcagctgatcaagcgctggcatgcgctgatccttgcacaccag
gacgacctggcccgcatcatttcgaccgagcagggcaagccgatccacgaagcacgtggc
gaggtgcagtatggcgcctcgtacgttgaatggttcgccgaagaggccacccgcatctgc
ggcgatatcgtcgcggaagcagtgccgggccgcaaactgctggtcctgaaggagccggtc
ggcgtggtggcagccatcacgccgtggaatttcccgctggcgatgatcgcccgcaagatc
gcccccgcgctggccgcgggttgcacggtggtggccaagcccgcggaagataccccgctg
acggccctggcgctggcgtggctggcgcaacaggccggcatcccggcaggcgtgctcaat
atggtcaccgcgtcgcgcgagcacacgccagacgtggtcgatgcctggctcgccgacagc
cgcgtgcgcaagatcaccttcaccggctccacgccggtgggcaagcacctggcgcgcgaa
tcggcggccacgctgaagaagctttcactggaactgggcggcaacgcgccgttcatcgtc
ttcgaagacgccgacctcgatgccgcggtcgacggcctgatggcctccaagttccgcaac
ggcggccagacctgcgtctgcccgaaccgcgtctatgtgcatgacgccgtgcacgacgcc
ttcgtcgagcgcctggcgcagcgcgtgggcgcgctccatgttggcccggcgacggaagag
ggcgcgcagattggcccgatgatcaacgcccgcgccgtcgacaagatcgcgcgccatgtc
gaagacgctgtcgccaggggcgcgcgcgtggtcaccggcggcaagcgcgtgcgcaccgcc
gacggtccgcactactacgcgccgacggtgctgatcgacgccacgccggcgatggagctg
tcgtgcgaggaaacctttggcccagtcgcgccgatcttccgcttccgcgacgaaaccgac
gtgatccgtgacgccaacgacaccccgttcggcctcgccgcgtatttctactccaacgac
atccgccgcatctggcgcgtggcgcaggcactggaaaccggcatggtcggcatcaacgag
ggcgcgattgcggccgaggcggcaccgttcggcggcgtcaaggaatccggctacgggcgc
gagggctcgcgccacgggctggacgactacatgcataccaagtacctttgccagggccag
cttggctga
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