Ralstonia pickettii DTP0602: N234_28080
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Entry
N234_28080 CDS
T03172
Name
(GenBank) hypothetical protein
KO
K20329
IclR family transcriptional regulator, positive regulator for flagellar biogenesis
Organism
rpj
Ralstonia pickettii DTP0602
Pathway
rpj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rpj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
N234_28080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rpj03000
]
N234_28080
Transcription factors [BR:
rpj03000
]
Prokaryotic type
Helix-turn-helix
IclR family
N234_28080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_IclR
MarR_2
MarR
HTH_24
HTH_11
HTH_36
HTH_26
HTH_Crp_2
RP-C
IclR
HTH_31
Rrf2
HTH_5
TrmB
DprA_WH
Dimerisation2
HTH_20
Motif
Other DBs
NCBI-GeneID:
17105513
NCBI-ProteinID:
AGW93894
LinkDB
All DBs
Position
2:1520749..1521528
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AA seq
259 aa
AA seq
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MTRPAQITMTLERGLHVLRAFRAERTPLTNAELVRRTGLSKATVSRLTTTLVALGFIRRV
AGSTQFELASGSLDIGDTYLETNPVTERVHPFMQALADRLNVSVSLAVPDQLDMLYIAHR
TSSRISTLRLGVGSLLPMGWTASGRAWLWGLRTDDRHDYLEALKHAAGARAGELERGIGA
AFQDLQTLGVCTSLGTYQRNAYGIALPVTVGRSATLMSLSCGAVALEPDMTAITQRIAPM
LKAAAAELVDLLRDTDAQI
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgacacgtcccgcgcaaatcacgatgaccctggagcggggcctgcatgtgcttcgcgcc
ttccgtgccgaacgtacgccactgacaaatgccgaactcgtcaggcgcactggcttgtcc
aaagcaacggtatcgcgcctgaccaccaccctggtcgcgctgggctttattcgccgcgta
gccggcagcacgcagttcgaactggcatcgggttctctcgacatcggggacacctacctg
gaaaccaaccccgtcaccgagcgcgtgcatccattcatgcaggcgttggcggaccggctc
aacgtgtccgtctcgctcgccgtgcccgaccagctcgatatgctgtacatcgcgcatcgg
accagttcccgcatttcgaccctgcgcctcggcgtcggatcgctgcttccgatgggttgg
acggcgagcggccgagcctggctatggggcttgcggactgacgaccggcatgactatctg
gaagccctcaagcatgccgccggcgcgcgtgccggcgaactcgaacgcggcatcggggcg
gccttccaggatctccagacccttggcgtatgcacgtccctgggcacctatcagcgcaac
gcatatgggattgcacttccggtcacggtgggacgttcggcaacactgatgtcgctgagt
tgcggcgccgttgcgcttgagccggacatgaccgccattacacaacgtatcgcgccaatg
ctgaaagccgcggcagccgagcttgtcgacctgcttcgggataccgatgcacagatctga
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