Ralstonia pickettii DTP0602: N234_30585
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Entry
N234_30585 CDS
T03172
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehdyrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
rpj
Ralstonia pickettii DTP0602
Pathway
rpj00250
Alanine, aspartate and glutamate metabolism
rpj00310
Lysine degradation
rpj00350
Tyrosine metabolism
rpj00650
Butanoate metabolism
rpj00760
Nicotinate and nicotinamide metabolism
rpj01100
Metabolic pathways
rpj01120
Microbial metabolism in diverse environments
Module
rpj_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
rpj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
N234_30585 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
N234_30585 (gabD)
00310 Lysine degradation
N234_30585 (gabD)
00350 Tyrosine metabolism
N234_30585 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
N234_30585 (gabD)
Enzymes [BR:
rpj01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
N234_30585 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
N234_30585 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
N234_30585 (gabD)
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GFIT
Motif
Pfam:
Aldedh
DUF1487
Motif
Other DBs
NCBI-GeneID:
17106017
NCBI-ProteinID:
AGW94392
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All DBs
Position
2:complement(2089156..2090607)
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AA seq
483 aa
AA seq
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MELQHTALLRSHCLIDGEWTGAQSGAELAVYNPATHEQIGSVPLAGAAETEQAVRAAERA
LPAWRAQTGKARAAVLRRWADLMLAHQEDLAQLMTAEQGKPLAEARGEVAYAASFLEWFG
EEAKRVDGEVLASPRSSQKLVVLREPVGVCAAITPWNFPAAMITRKVGPALAAGCTIIVK
PAEQTPLTALALAVLGEQAGVPRGVLQVVTGDAVQIGGVLCASPVVRKLSFTGSTAIGKL
LMAQCAGTVKKLSLELGGNAPLIVFDDADLDRAVEGILASKFRNSGQTCVCANRIYVHER
VYDEVARRLVSAVEQLRPGHGVDSEVTQGPLIDADAVAKVEAHIADALAHGAAVLTGGQR
HALGGTFFAPTVLANATSSMRVAREETFGPLAPLFRFSTEEEVVAMANDTESGLAAYFFS
RDMGKIWRVAQALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSSHGIDEYLETKYLCM
DVE
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggaactccaacataccgcgctgttgcgcagccattgcctgatcgacggcgaatggacc
ggggcgcaaagcggcgcagaactcgcggtctacaacccggcgacccacgaacagatcggc
tcggtgcccctggccggcgcggccgaaaccgaacaggcggtgcgcgccgccgagcgcgcg
ctgccggcatggcgcgcgcagacgggcaaggcgcgcgccgccgtgctgcgccgctgggcc
gatctgatgctggcgcaccaggaagacctggcccaactgatgaccgccgagcaaggcaag
ccgctggccgaggcgcgcggcgaggtcgcctatgccgcgagcttcctcgagtggttcggg
gaagaagccaagcgggtcgatggcgaggtgctggccagcccgcgcagcagccagaagctg
gtggtgctgcgcgagccggtgggtgtgtgcgcggccatcacgccgtggaacttcccggcg
gcgatgatcacgcgcaaggtcggcccggcgcttgccgccggctgcaccatcatcgtcaag
cccgccgaacagacgccgctcacggcactggcgctggccgtgctgggcgaacaggccggc
gtgccgcgtggcgtgctgcaggtggtgaccggcgacgccgtgcagatcggcggcgtgctg
tgcgccagcccggtggtgcgcaagctcagttttaccggctcgaccgcgatcggcaagctg
ctgatggcgcagtgcgccggcaccgtgaagaagctctcgctggaactgggtggcaacgcg
ccgttgatcgtcttcgacgacgccgacctcgaccgcgcggtggagggcatcctcgcctcc
aagttccgcaacagcggccagacttgtgtctgcgccaaccgcatctatgtgcacgagcgc
gtctatgacgaggtcgcgcgccgtctcgtcagcgcggtcgagcagttgcggccgggccat
ggcgtcgacagcgaggtcacgcaaggcccgctcatcgacgcggatgccgtggccaaggtc
gaagcgcatattgccgacgcgctggcgcacggcgccgccgtgttgacgggcggccagcgc
catgcgctcggcggcaccttcttcgcgccgacggtgctggccaatgcgacttcgtcgatg
cgggtggcacgcgaggagaccttcggcccgctggcaccgctgttccgcttcagcaccgaa
gaggaggtggtggcgatggccaacgataccgagtcggggctggccgcttacttcttctcg
cgcgacatggggaagatctggcgcgtggcgcaggcactcgagtacggcatggtcggcatc
aataccgggctgatctcgaacgaggtggcgccgttcggcggcgtcaagcaatcggggctg
ggccgcgaaggctcaagccatggcatcgacgagtatctggagaccaaatacctctgcatg
gacgtcgaataa
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