Ralstonia pickettii DTP0602: N234_33205
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Entry
N234_33205 CDS
T03172
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rpj
Ralstonia pickettii DTP0602
Brite
KEGG Orthology (KO) [BR:
rpj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpj03032
]
N234_33205
03400 DNA repair and recombination proteins [BR:
rpj03400
]
N234_33205
Enzymes [BR:
rpj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
N234_33205
DNA replication proteins [BR:
rpj03032
]
Prokaryotic type
DNA Topoisomerases
N234_33205
DNA repair and recombination proteins [BR:
rpj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
N234_33205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Ribosomal_L40e
Motif
Other DBs
NCBI-GeneID:
17106541
NCBI-ProteinID:
AGW94914
LinkDB
All DBs
Position
2:complement(2626435..2627499)
Genome browser
AA seq
354 aa
AA seq
DB search
MDSALATTEAAVTLEAVLRDAGLRYVDDSGPGITRRRHGSGFRYIGPDGERVRDAGTLAR
IAAMAIPPAYESVWICADPRGHLQATGRDARGRKQYVYHAEWAVLRDTDKYGRLLAFGTA
LPRLRARATRDLGRNGMPREKVVAAVVVLLDATLVRVGSPRYARQNRTYGLTTLRRRHVT
VRGSRLRFQFNGKSGITHDVSVNDPRLARIVRNCADLPGQRLFKYRDSDGEIREIGSADV
NAYLQEVTGGDFTAKDFRTWAGSVHALAILRKLPEADSESARKKAVADAIRQVAHQLRNT
MAVCRKCYVHPEVIDAYLAGALQARGKAPSATRLRADEARLLQLLAKTTSGAGK
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggatagcgcgctggcgaccacagaggccgccgtcacgctcgaggccgtgctgcgcgac
gcgggcctgcgctatgtcgacgacagcggaccgggcatcacgcgccgccgccacggcagc
ggcttccgctatatcggtcccgacggcgagcgcgtgcgcgatgccggcacgctggcgcgc
atcgccgcgatggcgatcccgccggcctatgaatcggtgtggatctgcgcggacccgcgc
gggcacctgcaggccaccgggcgcgatgcgcgcgggcgcaagcagtacgtctaccacgcc
gaatgggcggtgctgcgcgataccgacaaatacggccggctgctggcctttggcaccgcg
ctgccgcggctgcgggcgcgcgccacgcgcgacctcggccgcaacggcatgccgcgcgag
aaggtggtcgccgcggtggtggtgctgctggacgccacgctggtgcgtgtgggctcgccg
cgctacgctcggcagaaccgcacctacggcctgaccacgctgcgccgccgccatgtgacc
gtgcgcggcagccggctgcgcttccagttcaacggcaagagcggcatcacgcatgacgtc
tcggtcaacgacccgcgcctcgcgcgcatcgtgcgcaactgtgccgacctgccggggcag
cgcctgttcaagtaccgcgacagcgacggcgagatccgcgagatcggctcggccgacgtc
aacgcctacctgcaggaagtcaccggcggcgactttacggcgaaggatttccgtacctgg
gccggcagcgtgcatgcgctcgcgatcctgcgcaagctgcccgaagcggacagcgagagc
gcgcgcaagaaggccgtcgcggatgcgatccgccaggtggcgcaccagctgcgcaacacc
atggcggtgtgccgcaagtgctatgtgcatccggaggtgatcgacgcctaccttgccggc
gcgctgcaggcacgcggcaaggcgccgtcggcgacgcggctgcgcgcggacgaggcgcgg
ctgctgcaactgctggcgaagacaacctccggggccggcaagtga
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