Ralstonia pickettii DTP0602: N234_34260
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Entry
N234_34260 CDS
T03172
Name
(GenBank) Ada
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
rpj
Ralstonia pickettii DTP0602
Pathway
rpj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rpj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
N234_34260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rpj03000
]
N234_34260
03400 DNA repair and recombination proteins [BR:
rpj03400
]
N234_34260
Enzymes [BR:
rpj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
N234_34260
Transcription factors [BR:
rpj03000
]
Prokaryotic type
Helix-turn-helix
AraC family
N234_34260
DNA repair and recombination proteins [BR:
rpj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
N234_34260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
DUF1127
Motif
Other DBs
NCBI-GeneID:
17106752
NCBI-ProteinID:
AGW95124
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All DBs
Position
2:complement(2855659..2857158)
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AA seq
499 aa
AA seq
DB search
MNLDPDTCYKAVASHDRRFDGRFFVGVSSTGVYCRPVCAVRTPKRENCSFYESAAAAEKH
GFRPCLRCRPELAPGHGLADISGRLAQAAATLIDEGFMAEGSVAALAARIGVTERHLRRL
FDAQFGVSVLEYAQTQRLLLAKRLLADTALPVTEVALAAGFGSVRRFNDVLKTRYGLTPV
ALRRRAAEGVADRLVFELGYRPPLAWDAWLGFLATRAVDGIEQVRDGAYARTLQVEAGGS
THVGWVRIEHVTRRLVLRVTLSASLARVIPQALGKVRRLCDLGCRPDVVDRHLGELAQAV
PGMRLPGSVDGFEIAVRAVVGQVISVVHARRILGALAARAGQALPDTAPAGLRFAFPTAA
ALAALSPQTLRDAGVPAGKARTLQALAQRVADGTLALDAHAPPEQTVAALRAIDGIGDWT
AQYVAMRALGWPDAFPGTDYALRKVLGVSTVRAMHERTAQWAPWRAYAAIHLWHRYEALK
DNAAAQPEDAAATEPETIP
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcgatcccgatacctgctacaaggccgtggcgtcgcatgaccgccgcttcgac
gggcgtttcttcgtgggcgtgtcgtcaactggcgtgtactgccggccggtgtgcgccgta
cgtacccccaagcgcgagaactgcagcttctatgaaagcgccgcggcggccgagaagcac
ggcttccgcccctgcctgcgctgccgtccggagctggcgcccgggcacgggctggcggat
atctcgggccggctggcgcaggccgcggccacgctgatcgacgaaggcttcatggccgaa
ggcagcgtggccgcgctggccgcgcgcatcggcgtcaccgagcgtcacctgcggcgcctg
ttcgatgcgcagttcggcgtgtcggtgctggagtacgcgcagacacagcgcctgctgctg
gccaagcggctgctggccgataccgcgctgccggtgacggaggtggcgctggcggcgggc
ttcggcagcgtgcgccgtttcaacgatgtgctgaagacgcgctatgggctgaccccggtg
gcactgcgccgccgcgccgccgaaggcgtcgccgaccggctggtgttcgagctgggctac
cggccgccactggcgtgggacgcatggctgggcttcctggccacgcgtgcggtcgatggc
atcgaacaggtccgtgacggcgcctacgcgcgcacgctgcaggtggaggccggcggcagc
acgcatgtcggctgggtgcgcatcgagcatgtgacgcgccggctggtgctgcgcgtgacg
ctgtcggcgtcgctggcgcgcgtgattccgcaggcgctgggcaaggtgcgccggctgtgc
gacctgggctgccgccccgatgtggtcgaccgccacctgggcgagctggcgcaggcggtg
ccgggcatgcggctgccgggcagcgtcgacggtttcgagatcgcggtgcgcgcggtggtg
gggcaggtgatctcggtggtccacgcgcggcgcatcctgggcgcgctcgccgcgcgcgcc
gggcaggcgctgccggacaccgcaccggcgggactgcgctttgcatttcccacggccgcg
gcccttgccgcgctgtcgccgcagacgctgcgcgacgccggcgtgccggccggcaaggcg
cgcacgctgcaggcgctggcgcagcgcgtggcagacggcacgctggcgctcgatgcccac
gcgccgccggagcagaccgtggccgcgctgcgcgccatcgacggcatcggcgactggacc
gcgcagtatgtcgcgatgcgcgcgctgggctggccggatgcgttcccgggcaccgactac
gcgctgcgcaaggtgctgggcgtcagcaccgtgcgcgcgatgcacgaacgcaccgcgcaa
tgggcgccatggcgcgcgtacgcggccattcacctgtggcatcgctatgaggcgctgaag
gacaacgcggccgcgcagccggaagacgccgcagcgaccgaaccggagaccatcccatga
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