Rickettsia peacockii: RPR_04800
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Entry
RPR_04800 CDS
T00907
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rpk
Rickettsia peacockii
Pathway
rpk03030
DNA replication
rpk03430
Mismatch repair
rpk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RPR_04800 (dnaE)
03430 Mismatch repair
RPR_04800 (dnaE)
03440 Homologous recombination
RPR_04800 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpk03032
]
RPR_04800 (dnaE)
03400 DNA repair and recombination proteins [BR:
rpk03400
]
RPR_04800 (dnaE)
Enzymes [BR:
rpk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RPR_04800 (dnaE)
DNA replication proteins [BR:
rpk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RPR_04800 (dnaE)
DNA repair and recombination proteins [BR:
rpk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RPR_04800 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF5487
Motif
Other DBs
NCBI-ProteinID:
ACR47601
UniProt:
C4K203
LinkDB
All DBs
Position
complement(814640..818185)
Genome browser
AA seq
1181 aa
AA seq
DB search
MRPEFIHLRTQSSYSFLESALTIEKVVELASSNKMPAICLADKGNLFGSLEFALCAVKKG
LQPIHGVILNIKYDIDIFAQILLIAKDETGYKNLLKLSSLTFTKNDRKICDHIDFEDLIE
YQEGLIGLCCYTDGIVGKCLLARNEEQAMLFARKLQEILGDRFYFEIMRHELPEEQFIED
SYIRIAAELAIPLVATNKVLFSEKSMHDAHDVLLCISAGVTKEYLDRKTVSENCYFRSPH
EMIELFSDLPSAIQNTVNLRERCYFAAHANPPMLPNFATKDISETDLIKKDAKEGLLARL
ATKFKSENIALENQEALKTEYFARLNYELDIICNMNFAGYFLIVSDFIKWSKKEGILVGP
GRGSGAGSVVAWSLLITDLDPIKFGLLFERFLNPERISMPDFDIDFCQERREEVINYVRS
KYGNNRVGQIITFGKMQAKAVIKDVARVLSLPYKFADYLTELVPFSAVNPVSLKQALHEV
PELANAAKGNGLYNLDGEAELIKLVIDTSLILEGLHRHSSTHAAGIVIAGTDLVDIVPVY
KDSNSDMLVVGYSMKYSEIAGLIKFDFLGLQTLTVITDCKKLLKEQGIEVDFNNMTFDDN
KTYQMLCKGKGVGVFQFESIGMKDALRRLKPDSIHDLIALGALYRPGPMENIPTYIACKH
KLQQPDYLHELLKPILEETYGVVIYQEQVQRIAQVLAGYTLGAADLLRRAMGKKIKKEME
EQEEIFVKGAIANNISESQAKSIFATVAKFAGYGFNKAHAASYGVISYQTAYLKANYPAE
FLVACLNLELNNHDKINFFLQEAKDNGIKIIAPNINISEGYFSVKFSDTVIPHSVKPVIP
RLDRGIQEISKDTVVKPRYDIAGAIIFALGAIKGVTPNFGKLVTDERKARGAFKSITDFI
ERLPPKSINSKLLENLIKSGCFDELHDNRLQLLSSIPKLLSYSTAYHEEQESNQFSLIKV
SSLSPTILVSSDYADKNTLAFYEFEAMGLFISNHPLTEYQEIFSRLNILNTADLHNNLPD
GTNRVNLAGVIQKKDSRMSARGRFVTLVLSDPENIFELSIFSEEVLKDYVHLLDVKSLVV
VNCDIVKDEGGIKLTAKSFSSIEDAINNKQFELQFYPQNHEELRQIVTLLAARINNEDQS
NAKATIYLQSADVKNFVAKITLPEKFLLQGQDFEILKGYSK
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgcgacctgaatttattcatttaagaactcaaagctcttattcttttctagaaagtgca
ttaacgattgagaaggtagtagaacttgcttcatcgaataaaatgcctgctatttgtttg
gcagataagggaaatttattcggctcattagagtttgcattatgtgcagtaaaaaaagga
ctgcagccgatacacggagttattctaaatataaaatacgatatagatatttttgctcaa
attttgcttatagctaaagatgaaactggttataaaaatttactcaaactatcaagcctt
acttttactaaaaatgatcgtaagatatgcgatcacattgattttgaagatttaatcgaa
tatcaagaaggattaataggattatgctgttataccgacggtattgtcggaaaatgcttg
ctagctcgcaacgaggagcaagcgatgctgtttgcacgtaaattacaggaaattttagga
gatcgtttttactttgagattatgagacatgagctaccggaagaacagtttattgaggat
agttatattagaattgctgccgagctggctattccgcttgttgctactaataaagttttg
tttagtgagaaaagcatgcatgatgcacatgatgtattgttatgtatatcagccggtgtt
actaaagaatatctggatcgaaaaacagttagcgaaaattgttattttagatcaccgcat
gagatgatagagcttttttccgatttacctagtgccatccaaaataccgtgaatttaaga
gagcgttgttattttgccgcacatgcaaacccgccgatgctgcctaattttgccaccaaa
gatattagtgaaacggatttaattaaaaaagatgcaaaagaagggttgcttgcaaggctt
gctacaaagtttaaatctgaaaatattgcgttagagaatcaagaagcattgaaaaccgaa
tattttgctcgtcttaattatgagctggatattatctgtaatatgaattttgccggttat
tttttgattgtatctgattttattaaatggagtaaaaaagagggtattttagtcggaccg
ggtagaggatcgggagcaggctcggttgttgcttggagcttgcttattactgatctcgat
ccgattaaatttggcttattatttgaaagatttttaaatcctgaacgtatttcaatgcct
gattttgatattgatttttgtcaggaaaggcgtgaggaagtaattaattacgtacgttcc
aaatacggtaataatagagtaggacagattataactttcggtaagatgcaggcaaaggct
gtaattaaggatgtcgctcgtgtgcttagcttaccttataaattcgctgattatctaacg
gagcttgtcccttttagtgcagttaatccagttagcttaaaacaggcactgcatgaagtt
ccggagcttgcaaatgccgctaaaggtaatgggctgtataatttagacggtgaagcggag
ttaattaagttagtgattgatacttcgttaattcttgaggggctgcataggcattcctca
actcatgctgcaggaatcgtaatagcaggtactgatttagtcgatatagtaccggtatat
aaagattctaactccgatatgctggtagtcggttattctatgaaatattccgagattgcc
ggtttaattaaatttgattttttagggctacaaaccctaacggttattaccgattgtaag
aaactgcttaaagagcaagggatagaagtagattttaacaatatgacgtttgatgataat
aagacttatcaaatgttgtgtaaaggtaaaggagtcggcgttttccaatttgaaagtatc
gggatgaaagatgcacttagacgccttaaacctgattctatacatgatttgatagctctt
ggtgcgttataccgtcctggtcctatggaaaatattcctacctatatagcttgtaagcat
aaattacaacagcctgattatttacatgagctattgaaaccaatcttagaagaaacttac
ggagtggtgatatatcaggagcaggtacaaagaattgctcaggttcttgcaggttatacg
ctaggagctgccgatttacttcggagagcaatgggtaagaagataaaaaaagaaatggag
gagcaggaagaaatttttgttaaaggagcaattgctaataatatttcggaatctcaagct
aaatccatttttgcgaccgtggctaaatttgccggatatggttttaataaggcacatgct
gcgtcttacggtgttatttcataccaaactgcatatcttaaagctaattatcctgctgaa
tttttagtagcatgcttaaatcttgaattgaataatcacgataaaattaatttcttttta
caagaagcaaaagataacggcataaaaattattgcacctaatattaatatttctgaaggg
tattttagtgtaaagttttcggacactgtcatcccgcatagcgtaaagcctgtcataccg
cgacttgatcgtggtatccaggaaatttcaaaagataccgtggtcaagccacggtatgac
atcgcgggtgcaataatcttcgccttaggtgctattaagggagttacgccgaatttcggt
aagttagtaacggatgagcgaaaagcaagaggggcgtttaaatcaattactgattttatt
gaaagattacccccaaaatctattaacagtaaattattggaaaatttaatcaagtcaggc
tgttttgatgagctgcatgataatcgattgcaattattgtcaagtattccaaaattgctt
tcttattcaactgcatatcacgaagagcaggaatctaatcaatttagcttaattaaagtt
tctagtttaagtccaactattttagtatcaagcgattatgccgataaaaatactttagcc
ttttatgaatttgaggctatgggtttatttatctctaatcatcctcttacggaatatcaa
gaaatatttagtcgtttaaatattttaaatactgcggatttgcataataacttacctgat
ggtactaaccgagtaaatcttgccggtgtaatacaaaaaaaggattctcgtatgtcggca
agaggtaggtttgtgacgctcgtgctttccgatcctgagaatatctttgaacttagtatt
tttagtgaggaagttttaaaagattatgtacatttacttgatgttaaaagtttggtagtt
gttaattgtgacatagttaaagatgagggaggaataaaactaacggcaaaaagcttttca
tcaattgaggatgcaattaataataaacaatttgaactacagttttatccacaaaatcat
gaagaattacggcagatagtaaccttgcttgcagctcgtataaataatgaagatcagagt
aatgctaaagctacaatctatttacaaagcgcagatgtaaagaattttgtagcaaaaatt
acattacctgaaaaattcttgctccaagggcaagattttgagattttaaaaggatatagt
aaatag
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