Rickettsia peacockii: RPR_05375
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Entry
RPR_05375 CDS
T00907
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rpk
Rickettsia peacockii
Brite
KEGG Orthology (KO) [BR:
rpk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpk03016
]
RPR_05375
Enzymes [BR:
rpk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
RPR_05375
Transfer RNA biogenesis [BR:
rpk03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RPR_05375
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
ACR47668
UniProt:
C4K270
LinkDB
All DBs
Position
921171..922016
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AA seq
281 aa
AA seq
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MQIIDNQKTLEEFCNWLANKACLSIDTEFERRYTYYTQLSIIQVKAEEYCGIIDALSNLD
LNIFNKLLADNNITKIFHAPREDLEIFYNLFKTLPANVFDIQIAANICGFGKQLSYDDLC
YKLIGITIDKTHQKSNWLKRPITSDMLNYAMLDVEYLYKIYKELNNIIVRNNLTNKYQTT
LSALLDVRNYKVEPKDAWKKIKYGSDDKSFNHKIQMLAAYREENAQTINIPRKHFILDED
LIKLSKYPPLNHKDFKNLNLKSKYLHKQKYKDEIISLCNNL
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattatcgataatcaaaaaacattagaagaattttgtaactggttagcaaataag
gcatgcttaagcatagatacggaatttgagcgtcgctatacttattatactcagcttagt
ataattcaagttaaagcagaagaatattgcggaataattgatgcattaagcaatttagat
ctgaatatttttaataagctgcttgcagataataatattactaaaatatttcatgctcct
cgtgaagatttagagattttctataatttatttaaaacactacctgctaatgtttttgat
atacaaattgcagcaaatatttgcggattcggtaaacagctaagctatgatgacctttgc
tataagctaatcggtattactatcgataaaacccaccaaaaatctaactggctaaaacgc
cctattactagtgatatgttaaattatgcaatgttagacgtggagtatttgtataagata
tataaagagttaaataatataattgttagaaataatttaactaataaatatcaaactact
cttagtgctttattagatgttagaaattataaggttgagccgaaagatgcttggaaaaaa
ataaaatatggaagtgatgataagagttttaatcacaaaattcaaatgcttgcagcttat
cgtgaagagaatgcacaaactataaatattcctcgtaagcattttattttagatgaagat
ttaataaagcttagtaaatacccgccattgaatcacaaggattttaaaaatctaaattta
aaaagcaaatatttacacaaacaaaaatataaagatgaaataataagtttgtgtaataac
ttataa
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