Candidatus Rhodoluna planktonica: A4Z71_02530
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Entry
A4Z71_02530 CDS
T04564
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
rpla
Candidatus Rhodoluna planktonica
Pathway
rpla03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rpla00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
A4Z71_02530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rpla03019
]
A4Z71_02530
03009 Ribosome biogenesis [BR:
rpla03009
]
A4Z71_02530
Messenger RNA biogenesis [BR:
rpla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A4Z71_02530
Ribosome biogenesis [BR:
rpla03009
]
Eukaryotic type
Pre-60S particles
RNases
A4Z71_02530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AOY55883
UniProt:
A0A1D9DYK3
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All DBs
Position
complement(504175..504783)
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AA seq
202 aa
AA seq
DB search
MLPNSDHLVWIDCEMTGLNPEKDSLVEVAVVITTSELEIVDEGLTVVIRPRPESLESMSD
FVREMHASSGLLPELSTGLDLAEAEDVILEYIKRFVPNAKEAPLAGNSIGTDRMFINRYM
PKVDQHLHYRNVDVSSIKELSRRWYPRVYFQMPKKDGGHRALADIRESIVELRYYRETVL
VAAPGPSSEEAKLAAEKVQKSN
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgttgcccaattctgatcacctagtctggatcgattgcgagatgactgggctcaacccc
gagaaagattctctggttgaggttgctgtggttatcaccacatcagagttggaaattgtc
gacgaaggtttgaccgtggtgatcagaccacgacctgaatctttagagtcaatgagcgat
tttgtccgcgaaatgcacgcatcttctggacttttgcccgagctttcaaccggccttgat
ctggctgaggctgaggacgtaatccttgaatacattaagcgtttcgtgccaaacgctaaa
gaggcgccgctggccggaaacagcattggtaccgatcgcatgtttataaatcggtacatg
cccaaagttgatcagcatctgcactatcgaaacgtggatgtttcgtccatcaaagaattg
tctcgacgctggtacccgcgtgtttactttcaaatgcctaaaaaagatggcgggcaccgc
gccctagccgacatcagagagtcaattgtcgagcttcgctactatcgcgagacagttttg
gtagccgcaccgggaccgagcagcgaagaggcaaagttggccgccgaaaaagttcaaaaa
agcaactaa
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