Candidatus Rhodoluna planktonica: A4Z71_03285
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Entry
A4Z71_03285 CDS
T04564
Name
(GenBank) DNA topoisomerase IV
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rpla
Candidatus Rhodoluna planktonica
Brite
KEGG Orthology (KO) [BR:
rpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpla03032
]
A4Z71_03285
03400 DNA repair and recombination proteins [BR:
rpla03400
]
A4Z71_03285
Enzymes [BR:
rpla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
A4Z71_03285
DNA replication proteins [BR:
rpla03032
]
Prokaryotic type
DNA Topoisomerases
A4Z71_03285
DNA repair and recombination proteins [BR:
rpla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A4Z71_03285
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Inp1
FliT
Motif
Other DBs
NCBI-ProteinID:
AOY56013
UniProt:
A0A1D9DYY0
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Position
complement(658180..660564)
Genome browser
AA seq
794 aa
AA seq
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MSEIISASEKIQDIDVSMEMKDSFLEYSYSVIYARALPDARDGLKPVHRRIIYQMGEMGL
RPDRGHVKSARVTGEVMGKLHPHGDSAIYDALVRMAQDFSLRYPLIDGHGNFGSLDDGPA
AARYTEARLAPLALVMNESLDENVVDFKPNYDAQLSEPEVLPAAFPNLLVNGSAGIAVGM
ATNMAPHNLREVIAGAIHLLDHPEATLDDLMDFIPGPDLPTGATILGIDGIRDAYASGRG
SFKMRAKTTVETVGPRKLGIVVSALPYLVGPEKVIEKIKDGVNSKRIVGISAVTDLTDRA
NGMKLVIELKTGFDPNVVLELLYKFTPMEESFAINAVALVNGRPESLGLRDLLGVYLAHR
VLVVRRRSSNRLGKRTARLHLVEGLLVAIESIDEVIQVIRTSDEVAAARERLMQIFDLSE
IQAEYILELKLRRLTKFSRIELETEQSQLKAEIAELRAILADDSKLRSLVADELREVAKT
YGDERRSAIQDGQVVVQSMASALKSASSAELSDEPCSIVLTAAGQIARLANSNDLSGRYL
AQVSTTTRSDLGFAASDGSVIRIHAADIPEFANENQLNSAPKVNDFLGISAKFVSLIDLN
DTSTAIAIGTKQGVVKRVLPEFPDKHEFEIISLKEGDAVVGVARAGDDAELIFTTKDTQT
LIFPAASVRPQGRPAGGMAGIGLSENDEVIYFDSVKPDSSLVSAACSDAALPGTDPGSAK
QTPLAEFPRKGRATGGVRSQKLLKGEDRLYFAAQLSEESVLFDETGRKISVSIPTAKRDA
SGQKLSSPLASCSY
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagataatttcagccagcgagaaaatccaagacatcgacgtttcgatggagatg
aaggattcgtttcttgaatactcgtattcggttatttacgcacgtgcgttgcctgacgcc
agagacggtctaaaaccagtccaccgaagaatcatttaccaaatgggcgaaatgggcctt
cggccagatcgaggacacgtcaagtctgcccgagtaacaggcgaagtcatgggtaaattg
catccgcacggcgacagcgcaatctatgacgcgctggtgcgcatggcccaggatttttcg
ctccgctatcccctcattgacggacatggaaactttggcagcctggacgatggcccagca
gctgcgcgctacacggaagctcgtttggccccgcttgctctggttatgaacgagagtttg
gatgagaatgtagtcgactttaaacccaattacgacgcccagctctccgagcccgaagtt
ttacctgcggcatttccgaatcttttagtcaacggttccgctggtatcgcggttggtatg
gccacaaacatggcaccacacaatctgcgtgaagtcattgccggagcaatccacttgctt
gatcatcctgaagcgacgctggatgacctgatggatttcatccccggaccagatttgccg
accggagcaacaattttgggcattgacggcattagagatgcatacgcaagcggtcgtgga
agcttcaagatgcgagccaaaacaaccgttgagacggtgggaccaagaaagctcggaatc
gttgtttctgctcttccctatctggtcggtccagaaaaagtaatagaaaagatcaaagac
ggcgtcaacagcaaaagaattgtcggcatctcggcggtaactgacctaaccgatcgggct
aatggcatgaaattggttattgagttaaaaactggtttcgatccgaatgtcgttctagag
ctgctgtacaagttcacgccgatggaggaatcgtttgcaatcaacgccgttgcgctggtc
aatggtcgaccagagtcgcttggcctgagggatctcttgggcgtatacctagcgcatcgc
gtactggtcgttcgacgtcgaagttcgaatcgactcggtaagcgcactgcccgcttgcat
ctggttgagggtcttctagtcgccatcgaaagcattgacgaggtcatccaggtaattcgc
accagcgatgaggttgccgcggcacgcgagcggttgatgcagatcttcgacctctccgag
attcaggccgagtacatccttgaactaaaacttcgtcgactaactaaattttctcgtatc
gaactggaaactgagcagagccaactcaaagcagaaattgcagaactccgggcaattttg
gctgacgactctaaattgcgatcactcgttgccgatgagttgcgagaggtagcgaaaacc
tacggtgatgagagaagatcggcaattcaggatggtcaagtcgtcgttcagagtatggca
tctgctctgaagtcggcatcatccgcagagctttccgatgagccttgctcaatagttttg
acagcagcaggtcagatcgctcgactagccaactccaacgacttatcgggccgctatttg
gcccaagtatcaacgactactcgatcagatttgggctttgcggcttcggatggatcggtg
attcgtattcacgctgcagacatccccgagttcgcaaacgagaatcagcttaactcggca
cctaaggtaaatgattttctgggaattagcgcaaaatttgtttcgctaattgacctgaac
gacacatcaacagcaattgccatcggaaccaagcagggtgttgtgaagcgagtgctccct
gaattccccgataagcacgagttcgaaataatttcactcaaagagggcgatgccgtcgtt
ggcgtcgcacgagcgggcgatgatgccgagcttattttcacaaccaaagacacccaaacg
ctgattttcccggccgcaagcgttcgtccgcaaggtagaccggcaggcggaatggctgga
atcggcctctcggaaaatgatgaagtcatttactttgattcggttaagccagatagctct
ctagtttctgccgcctgttcggacgccgcactgcctggtaccgacccaggttcggctaaa
caaacaccgttagccgaattccctcgcaaaggacgcgctaccggaggtgtccgaagtcaa
aaacttctaaagggggaagaccggctctacttcgcggctcaacttagcgaagagtcggtt
ttgttcgatgaaaccggcaggaaaatttctgttagcatcccgactgccaaacgcgatgca
tcgggccaaaaactgtcttcgccattagcaagttgcagttattag
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