Candidatus Rhodoluna planktonica: A4Z71_03430
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Entry
A4Z71_03430 CDS
T04564
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
rpla
Candidatus Rhodoluna planktonica
Pathway
rpla03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A4Z71_03430 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpla03400
]
A4Z71_03430 (ruvB)
Enzymes [BR:
rpla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A4Z71_03430 (ruvB)
DNA repair and recombination proteins [BR:
rpla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A4Z71_03430 (ruvB)
RecFOR pathway proteins
A4Z71_03430 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
DUF815
Sigma54_activat
AAA_22
AAA_16
bpMoxR
IstB_IS21
AAA_14
Sigma54_activ_2
AAA_3
nSTAND3
TIP49_C
RNA_helicase
MCM
TsaE
Rad17
Resolvase
AAA_33
AAA_18
NB-ARC
NTPase_1
AAA_28
DNA_pol3_delta2
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AOY56036
UniProt:
A0A1D9DZ09
LinkDB
All DBs
Position
684969..685943
Genome browser
AA seq
324 aa
AA seq
DB search
MIEDQTADSEFVGENALRPQSLTEFIGQEVVREQLITVLSAAQAQQRAADHILFSGPPGL
GKTTLAMIVANETGARLRITSGPSIQHGGDMAAILASLAEGEVLFIDEIHRLSRPVEEML
YLAMEDRRIDIVIGKGPGATAVPLELPPFTLVGATTKSGALPAPLRDRFGFTAHMDFYDE
SELAQIIRQSAMRLSVAIDDAAVELIAKRGRGTPRVANRLLARARDLAVVEKAGKIGLDS
AERAMKLFGIDALGLDRMDLLVLNTLSSLLPGQAMGLKTLANQIGESSETVEDAIEPYLL
RCGLIIRSSRGRQLSDLGRQHLGL
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagaccagacagcagattccgagtttgtgggagagaacgcactgcgcccgcaa
agtttgactgagtttattggccaagaggtcgttcgcgaacagttgatcacggtgctttcg
gcggcgcaggctcaacagcgggccgccgatcacatcctcttctccgggccacctggatta
ggtaaaacgacgttggccatgattgtggcaaacgaaaccggtgcgagattgcgcatcact
agtgggccgtctatccagcacggtggtgacatggctgcaattttggcttcgcttgctgag
ggtgaggtgcttttcattgatgaaatccatcgcctgtctcggccggttgaggaaatgctt
tatctggccatggaagacagacggatcgacatcgttattggcaagggtccgggggctacc
gcggtcccgcttgagttgccaccttttacgctcgtcggtgccacaaccaagagcggggca
ttaccagctccgttacgtgatcgttttgggtttaccgctcacatggatttctacgacgaa
tctgaattggctcagattattaggcaatctgcaatgcgactttcggttgctatcgatgat
gccgcggtcgaattgattgcgaaacgaggtcgcggcacaccacgagtagcgaatcgtttg
ttagccagagcgcgagatttagcggttgtcgaaaaggcaggcaaaattgggctcgactca
gccgaacgggctatgaaactgttcggaatagatgcattggggctagaccgcatggatctt
ctggtgttgaacacgctctcttcactgctgccaggccaagcgatgggcctcaaaactctg
gcaaaccagattggcgaaagctcagagacagtggaagatgcgattgagccctatcttttg
cgttgtggattgatcatacgcagtagccgcggtcgacaattgtctgatttgggtcgccag
catctcggactataa
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