Candidatus Rhodoluna planktonica: A4Z71_04095
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Entry
A4Z71_04095 CDS
T04564
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rpla
Candidatus Rhodoluna planktonica
Pathway
rpla03030
DNA replication
rpla03430
Mismatch repair
rpla03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A4Z71_04095
03430 Mismatch repair
A4Z71_04095
03440 Homologous recombination
A4Z71_04095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpla03032
]
A4Z71_04095
03400 DNA repair and recombination proteins [BR:
rpla03400
]
A4Z71_04095
Enzymes [BR:
rpla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A4Z71_04095
DNA replication proteins [BR:
rpla03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A4Z71_04095
DNA repair and recombination proteins [BR:
rpla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A4Z71_04095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MCM10_OB
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AOY56156
UniProt:
A0A1D9DZC4
LinkDB
All DBs
Position
complement(816758..820273)
Genome browser
AA seq
1171 aa
AA seq
DB search
MSSDSFVHLHVHTEYSMLDGAARVKPLIEAAAEQGMPAIGITDHGNNFGAFDFYKTAKAA
GIKPLIGIEAYVAPGTKRQERTRVRWGSGGEDDVSGGGAFTHMTMLAKTTEGMYNLFKMS
SKAWLDGFYFKPRMDTELFEQYGKGIIATTGCASGEVQTRLRLGQYDEARKAAAKLQDIF
GKENYFAEIMDHGLEIERRTTSDLIRLAKDLGMPLVASNDLHYTHAGDAVAHEALLCVQS
GSTLADPNRFKFDSQEFYLKSARQMRELFADYPEACDNTLLIAESCNVEFLDRELMPRFP
VPEGHTEASWFEAEVTRGMARRYPNGIPEAQANQVAYEVDVIKQMGFPGYFLVVADFIGW
AREQGIRVGPGRGSAAGSIVAYALGITELDPVKHGLIFERFLNPERVSMPDIDVDFDDRR
RAEVIRYVSDKYGDDRVAQIVTYGTIKAKQALKDAARVLAMPYSVGEKLTKAMPPMVLGR
DVTLNDLVDKNSERYKEAADFRELIEVDEESAKVFELAQGLENLKRQWGVHAAGVIMSAE
PLIDVIPIMKREDDGAVITQFDQPPCEKLGLLKMDFLGLRNLTVLDDALANIKSNRGEVV
VLEDLDLDSDPATFELLSRGDTLGVFQLDGNAMRSLLRLLKPSLFEHISAVIALYRPGPM
GMNSHTNYALRKNGLQEVDSVHPELEESLADILNPTYGLIVYQEQVMAAAQKAAGFTLGK
ADLLRRAMGKKNKEELDKQYEGFSEGMRANGYSDGAIKALWDTLLPFADYAFNRAHSAAY
GVLSYWTAYLKANFPAEYMAALLTSVGDSKDKLALYLSECRRMGIQVLPPDVNESIAAFN
AVGEDIRFGLGAVRNVGVNVVEGIVEARRTLGNFTSFQDFLRKVPASVCSKRVVESLIKA
GAFDSLGHTRRALLEVHEEAVDSQATIKKNEASGQVDLFGSLFGDDSENSFDVKVPDRVE
FTKKEKLAYERDMLGLYVSDHPLAGREAVIARFAEISIGDVVASETLRDGETVVIAGLVT
AVAHKVARASGNPYGAVTIEDFEGEMTVMLMGKTYQEFGKTLEADQLVVVRGRISQRDDG
NSLQAYSVETIDAAAEQNVGPLQIRIPESEATRKALEELDRILKVHAGNEEVHVTLLSSN
GERSFKLQPKVKVTQDLIGELKVLFGSGILG
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgagcgactctttcgttcacctgcacgtgcacaccgagtattcgatgctggatggc
gctgctcgagttaagccgcttattgaggcagccgctgagcagggtatgcccgccattggc
ataactgaccacggcaataactttggtgccttcgatttttacaaaactgcaaaagccgcc
ggaatcaagccgctaatcggcatcgaagcttatgtcgccccgggcaccaagcgccaggag
cgcaccagggtgcgctggggttccggtggcgaagatgacgtttctggcggtggcgcattt
acccacatgaccatgctcgcaaaaacaactgagggcatgtacaaccttttcaaaatgtca
tccaaggcttggctagatggtttctatttcaagcccaggatggacaccgagctctttgag
cagtacggcaaaggcattatcgccaccaccggttgcgcctcgggcgaggtgcaaacgcga
ctgcgccttggtcagtacgatgaggcacgtaaagccgcggccaaactgcaggacatcttc
ggtaaagaaaattactttgctgaaatcatggatcacggtttagaaattgaacgacgaacc
acgtctgatttgattcgcctggccaaagacctcgggatgccgttggtggcatccaacgac
ttgcactacactcacgccggagatgcggttgcccatgaggctttactctgcgtgcaatct
ggttcaactctggccgatccaaaccgtttcaaatttgattcgcaagagttttatctgaag
tcggcccgccagatgcgcgagttatttgccgattaccccgaggcttgcgacaacacccta
ctaatcgctgaatcctgcaatgttgagttcttagatcgcgagctcatgcctcgattccca
gtgcccgagggtcacactgaggcgagctggttcgaggccgaagttacccgaggaatggct
cgccgttatccaaacggcatacctgaagcgcaggcaaaccaggtggcctatgaggttgac
gtaatcaagcagatgggattccccggctacttcttggtggttgccgactttattggttgg
gctcgcgagcaaggaatccgtgtcggtccggggcgaggttcagcggccggttcaatcgtt
gcctacgcacttggaattaccgaacttgatccggtcaagcacggtttgatttttgagcgc
tttttgaatccagagcgtgtctctatgccagatatcgatgttgattttgacgatcgtcgt
cgagctgaagttattcgctacgtaagcgacaaatacggggatgaccgggtcgctcagatc
gtgacttatggaaccattaaggccaaacaagctctgaaagatgctgcacgtgttttggcc
atgccttactcggttggcgaaaaactcaccaaggctatgccgccaatggttctcggccgc
gatgtgacgctcaacgacctggttgacaagaactccgagcgctacaaagaagctgctgac
tttagagaacttattgaggtagacgaagaatcggccaaagtatttgaactagcccaaggt
ttagaaaatctgaagcgacagtggggtgttcacgctgctggtgtcatcatgtctgctgaa
cccctaatcgacgtcatcccaatcatgaagcgtgaggatgacggcgccgtgattacgcag
ttcgaccagccgccttgcgaaaagcttggtctgctaaaaatggacttcttgggccttaga
aacctaaccgtgctagacgacgctctagccaacataaaatctaaccgcggtgaagtcgtg
gtgctcgaagatctcgaccttgactccgatccagcaacctttgaattgctgtctagaggt
gacaccttgggtgtcttccagctcgatggtaatgctatgcgatcactgctgcggttgcta
aaaccctcgcttttcgagcacatttccgcggtaatcgccctttaccgacccggccccatg
ggtatgaattcgcacaccaactacgcattgcgaaaaaacggattgcaggaggttgactcg
gttcaccccgaactcgaagaatctctcgccgatattttgaacccaacctacggtctgatt
gtttatcaggaacaggttatggccgctgctcagaaagctgccggttttaccctgggtaaa
gccgacttgctgcgtcgcgccatgggtaaaaagaacaaagaggaactggataaacagtac
gagggcttctccgagggtatgcgagccaacggatattccgatggggcaataaaagcgctt
tgggacacactgcttccttttgccgactatgcgtttaaccgcgctcacagtgccgcctac
ggtgtgctttcatactggaccgcctatttgaaagccaattttccggccgagtatatggcg
gcattgctgacctcagttggcgattcgaaagacaaactcgccctctacctgagcgagtgt
cgaagaatgggcattcaggtattaccgccggatgtcaacgagtcaattgcggcattcaac
gccgttggtgaagacattcgttttggccttggtgccgttcgaaatgtcggagttaacgtg
gtcgagggaattgtcgaagcacgtcgcaccctgggaaatttcacgtcattccaggatttc
ctgcgcaaggttccagcttcggtttgctcgaagcgagtggtcgaatcactaattaaggct
ggtgccttcgactctctgggtcacactcgccgggctttgttagaggtgcacgaagaggca
gttgattctcaagcaactatcaagaagaacgaggccagcggtcaggtagatctattcggt
tcgttgtttggcgacgactctgaaaattcttttgatgtcaaagttccagaccgagttgaa
ttcactaaaaaagagaaattggcttacgagcgagacatgcttggcctctacgtaagtgat
caccctctggctggccgagaggcagttattgctcgatttgctgaaatttcaatcggcgac
gttgttgctagcgaaactctgcgcgatggcgagactgtggtcattgccggtttggtaact
gccgtcgctcacaaggtagcgcgtgcttccggaaatccatatggggcagtaaccattgaa
gatttcgaaggtgaaatgactgtcatgttgatgggtaagacctatcaagaatttggtaaa
accctagaggctgatcagctggtggtggttagaggccgcatttcccagcgagacgacggt
aacagtctgcaggcgtactcagtcgaaacaattgacgcagccgcagaacaaaacgtgggc
ccgttacaaattcgaattccggagagcgaagccactcgcaaagcacttgaagagctggat
cgcattctaaaagtccacgccggaaacgaggaagtgcacgttaccctgctcagttcaaat
ggtgagcgcagcttcaaacttcaaccaaaggtaaaagtcacacaagatctaatcggcgag
ctgaaagtgctgttcggctcaggaattttgggctaa
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