Candidatus Rhodoluna planktonica: A4Z71_04640
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Entry
A4Z71_04640 CDS
T04564
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rpla
Candidatus Rhodoluna planktonica
Brite
KEGG Orthology (KO) [BR:
rpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpla03016
]
A4Z71_04640
Enzymes [BR:
rpla01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
A4Z71_04640
Transfer RNA biogenesis [BR:
rpla03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
A4Z71_04640
Prokaryotic type
A4Z71_04640
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AOY56252
UniProt:
A0A1D9DZK4
LinkDB
All DBs
Position
complement(928336..929202)
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AA seq
288 aa
AA seq
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MTSHDVVAKVRRLVGTRKVGHAGTLDPMATGLLVLGIESATRLLTFIVGADKTYEATIRL
GASTVTDDRESDFLAIAPKETLESLSESQILLEVAKLTGEVMQVPSSVSAIKIDGQRAYA
KVRGGEAVELASRPVTVERFELLAQPRWVEVAGNSFLEIDVVVDCSSGTYIRALARDLGA
ALGVGGHLSALRRTRVGGYRVSDAYRFDQDFSATAIMPNAQAAREIFPEIQLSAAEKQDL
VHGKRIANRICSTESIAAFDSNDRLVAILEPVGANLKSAVVFAEAIND
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaccagccacgacgttgtcgctaaagtgcggcgcttggttggaaccagaaaagttggt
cacgccggcacactcgatccgatggcaaccggcttactggtgctcgggattgaatcggca
acaaggttactgacttttatcgtcggagccgataagacttacgaggccacaatcaggtta
ggtgcgagcactgttaccgacgaccgcgaatctgattttttggcaatcgcaccaaaagaa
acacttgagtcgctgagtgaatcgcagattttgctcgaagtggcaaaacttaccggcgaa
gtaatgcaggtaccctcttcggtctcggcaataaaaattgacggtcaacgggcctacgcc
aaagtgcgcgggggagaggcagtcgaactagcctctaggccggtaacggtagagcgcttt
gagttgctggctcaacctcgatgggttgaagttgctggaaatagttttttagaaattgat
gtagttgtcgactgctcttcaggaacctacattcgggccctggccagagacttgggtgct
gctctaggtgttggcggacacttgagtgcgcttcgtcgaactagggttggcggctatcgg
gttagcgacgcctatcgctttgatcaagatttctcggcgactgcaatcatgccaaacgcc
caggcagctcgagagatatttcctgagatccagctttctgctgccgaaaaacaagatttg
gtccatggcaagcgcatcgctaatcgcatctgcagcactgagtcgatagctgcctttgac
tcaaatgaccggctggtagcaatacttgaaccggttggtgcaaatctcaagtcagctgtg
gtgtttgcggaggcaataaatgattga
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