Candidatus Rhodoluna planktonica: A4Z71_05555
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Entry
A4Z71_05555 CDS
T04564
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rpla
Candidatus Rhodoluna planktonica
Pathway
rpla03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rpla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A4Z71_05555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpla03400
]
A4Z71_05555
Enzymes [BR:
rpla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
A4Z71_05555
DNA repair and recombination proteins [BR:
rpla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
A4Z71_05555
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AOY56416
UniProt:
A0A1D9E038
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All DBs
Position
1116653..1117477
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AA seq
274 aa
AA seq
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MPIQIATINVNGVRAAFRKGMVDWLNANSGIEILALQEVRASDADLDDLFAQHGGLAKDG
GQWHVLHDVASAKGRAGVAIVSKIPAIAVRTELGAPDFDSAGRWLEADFEIAGKTLTVIS
TYVHSGEADTPKQVEKYKFLEAMRERMAQLISTTDYVLVTGDLNVGHTELDIKNWKGNLK
NAGFLPEERAYFDDFMHKQGWVDIGRASHPGEPGPYTWWSFRGQAFDTDAGWRIDYHLAT
PKLAAVASNYRVHRAASYDTRFTDHSPVSVSYAL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgccaattcaaattgccaccatcaacgtcaatggcgttcgcgccgccttcagaaaaggc
atggtcgattggctaaacgccaattctggaatcgaaattctggcgctgcaggaagtgcgc
gctagcgacgctgatctagacgatctttttgcccagcacggcggtctggcaaaagacggt
ggccaatggcatgtgctgcacgacgtggccagcgccaaaggtcgagccggggttgcgatt
gtcagcaaaataccggcgattgcggttcgcaccgaacttggcgcgccagactttgactca
gccggtcgctggttagaggccgattttgaaattgccggaaaaacgctcactgtcatcagc
acctatgtgcactccggcgaggccgatacgccaaaacaggttgagaaatacaaattttta
gaagccatgcgtgagcggatggcgcaactgatctcgaccacagactatgtcttagtcacc
ggtgacctcaacgtaggtcacactgaactagacataaaaaattggaagggcaacctcaag
aacgccggtttcttacccgaagagcgagcctactttgatgacttcatgcacaagcagggt
tgggttgacattggccgtgccagccacccgggcgaacctggcccctacacctggtggtct
tttagaggtcaggccttcgataccgatgcgggctggagaattgactatcacctagccact
ccaaagttagccgctgtagctagcaactaccgggttcatcgagcagcgagctatgacact
cgctttaccgaccactcgcccgtgagcgtttcctacgccctctaa
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