Candidatus Rhodoluna planktonica: A4Z71_05815
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Entry
A4Z71_05815 CDS
T04564
Name
(GenBank) hypothetical protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
rpla
Candidatus Rhodoluna planktonica
Brite
KEGG Orthology (KO) [BR:
rpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpla03016
]
A4Z71_05815
Enzymes [BR:
rpla01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
A4Z71_05815
Transfer RNA biogenesis [BR:
rpla03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
A4Z71_05815
Prokaryotic type
A4Z71_05815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
AtzH-like
Motif
Other DBs
NCBI-ProteinID:
AOY56464
UniProt:
A0A1D9E083
LinkDB
All DBs
Position
complement(1171947..1172792)
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AA seq
281 aa
AA seq
DB search
MADGLFRFKLRLSYDGTDFSGWAKQPNLRTVAGELIKALSILFGDDATDFGLRVAGRTDA
GVHALNQVAHVDLSAEQLKRLGRDSRWLGRLNSLLPNDIHVDEIAAAAPGFDARFSATFR
SYRFRIADGASQKNPLQSRYTLWLPKPLDLPTMQQAAEKLYGLHDFASFCKPREGSTTIR
ELREISVTRNNHDGDVIEIFLTADAFCHNMVRSIVGALIAVGEGRASAADIESKLKAASR
VGSYKVVAPHGLTLIEIGYPTDDLLAAQAEKARSVRTLEEY
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgggctgtttcgttttaaacttcgtctttcgtacgatggcactgatttcagc
ggatgggccaaacagccaaacttgcgcaccgttgccggtgaattaatcaaggctctcagc
atactttttggtgacgatgccactgactttggtcttcgcgttgccggtcgcaccgatgcc
ggagtgcatgccctgaatcaggtagcacacgtcgatctttcggccgagcaactcaaacgg
ctagggcgtgattctcgctggctcggtcggctcaattccttattgcccaacgatatccat
gttgatgaaattgcggctgcggcacccggctttgatgcaaggttttcggcaacttttcgc
agctatcgctttcgaattgccgatggcgcctcgcaaaaaaaccctctgcaatctcgctat
acgctgtggttgccaaagcctttagacctgccaactatgcagcaggccgccgaaaaactt
tatggtttgcacgattttgcttcattttgcaaacctcgcgagggttcgaccaccattcgt
gaactgcgtgagatctcggtcaccagaaacaatcacgacggcgatgtaatcgaaattttt
ctaaccgcggatgccttttgccacaatatggtgcggtccatcgttggcgcactgattgcg
gtgggcgaggggcgggcttcagcagcagatattgagtcaaagctgaaagcggcatccagg
gtgggttcttataaggttgttgccccgcacgggttgaccctgatcgaaattggttatccg
actgacgacctcttagccgcccaagccgaaaaggcccgaagcgttcgcaccctcgaagaa
tattag
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