Klebsiella planticola: B1209_02810
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Entry
B1209_02810 CDS
T05298
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
rpln
Klebsiella planticola
Pathway
rpln03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rpln00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B1209_02810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rpln03019
]
B1209_02810
03009 Ribosome biogenesis [BR:
rpln03009
]
B1209_02810
Enzymes [BR:
rpln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B1209_02810
Messenger RNA biogenesis [BR:
rpln03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B1209_02810
Ribosome biogenesis [BR:
rpln03009
]
Prokaryotic type
rRNA helicases
B1209_02810
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
DeaD_C
ResIII
CMS1
AAA_22
Cas3-like_C_2
DRTGG
Motif
Other DBs
NCBI-ProteinID:
AUV51926
LinkDB
All DBs
Position
575241..577208
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AA seq
655 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAAF
SLPLLNNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG
HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTAYGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLAKIQPSAEGEELD
IETLAAALLKMAQGERPLILPPDAPMRPKREFRDRDDRFERRGDRNDRGPRGDRPERSGE
DRPKRERRDVGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFGTHSTIEL
PKGMPGEVLQHFTRTRILNKPMNMQLLGDAQPRPDRGGERRGGGERREGGRAFGGERREG
GRNFGGGERREGGRGDGRRFSGERRDGARAPRRDDAAAAPRRDDSAGRRRFGGDA
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcccatccttgaagcg
cttaacgatctgggttacgaaaaaccatctccgatccaggctgagtgcattccgcatctt
ctgggcggccgcgacgttctgggtatggcccagacgggtagcggtaaaaccgcagcgttc
tctttaccgctgctgaacaatcttgatcctgagctgaaagcaccgcaaattctggtgctg
gcgccgacccgcgaactggcggtacaggttgctgaagcaatgacggacttctctaaacat
atgcgcggcgtaaacgtggtagccctttacggcggccagcgttatgacgtgcagctgcgt
gctctgcgccagggaccacaaatcgttgtgggtaccccaggtcgtctgctggaccacctg
aagcgcggtactcttgatctctctaaactgagcggtctggtactggatgaagctgacgaa
atgttgcgtatgggcttcatcgaagacgtagaaacgattatggcgcagatcccggaaggt
catcagaccgctctgttctctgccaccatgccggaagcgatccgtcgcattacccgccgc
tttatgaaagagccgcaggaagtgcgcatccagtccagcgtcacgactcgcccggacatc
agccagagctactggactgcttacggtatgcgtaaaaatgaagcgctggtgcgtttcctg
gaagcggaagattttgatgcggcgattatcttcgttcgtaccaaaaacgcgaccctggaa
gtggctgaagcgctggagcgtagcggctacaacagcgccgcgctgaacggcgacatgaac
caggcgctgcgtgagcagactctggagcgtctgaaagatggtcgtctggatatcctgatt
gcgaccgacgttgcggctcgtggccttgacgttgagcgtatcagcctggttgttaactat
gatatcccgatggactccgagtcttacgttcaccgtatcggccgtaccggtcgtgcgggt
cgtgctggccgcgcgctgctgttcgttgagaaccgtgaacgccgcctgctgcgtaacatc
gaacgcaccatgaagctgacgatcccggaagtcgaactgccgaacgcagaactgctgggc
aaacgccgtctggaaaaatttgccgccaaagttcagcagcagctggaaagcagcgatctg
gatcagtaccgtgcgctgctggcgaaaatccagccgtctgctgaaggtgaagagctggat
atcgaaaccctggccgcagccctgctgaaaatggctcagggcgaacgtccgctgattctg
ccgccggatgcaccgatgcgtcctaagcgtgaattccgcgaccgtgacgatcgtttcgag
cgccgtggcgaccgcaacgaccgtggtccgcgtggcgaccgtccggagcgtagcggtgaa
gatcgtcctaagcgcgaacgtcgcgacgtgggcgatatggaactgtatcgcattgaagtg
ggccgcgatgatggcgttgaagttcgtcatatcgttggcgctatcgctaacgaaggcgac
atcagcagccgttacatcggtaacatcaagctgttcggtacccactccacgatcgaactg
ccgaaaggcatgccgggcgaagttctgcagcacttcactcgtactcgcatcctgaacaag
ccgatgaacatgcagctgctgggcgatgctcagccgcgtccggaccgtggcggcgagcgt
cgtggcggtggtgaacgccgtgaaggcggtcgcgcattcggtggcgaacgtcgtgaaggc
ggccgcaacttcggtggtggtgagcgtcgtgaaggcggccgtggtgatggtcgtcgtttc
agcggcgaacgtcgtgacggtgctcgtgctccgcgtcgtgatgatgcagctgcggctccg
cgccgtgatgattccgctggtcgtcgtcgtttcggtggcgatgcgtaa
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