Raoultella planticola: B1209_04575
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Entry
B1209_04575 CDS
T05298
Name
(GenBank) oligogalacturonate lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
rpln
Raoultella planticola
Pathway
rpln00040
Pentose and glucuronate interconversions
rpln01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rpln00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
B1209_04575
Enzymes [BR:
rpln01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
B1209_04575
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Gene cluster
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Motif
Pfam:
Pectate_lyase22
PD40
Motif
Other DBs
NCBI-ProteinID:
AUV52209
UniProt:
A0A443VLB3
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Position
complement(919307..920482)
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AA seq
391 aa
AA seq
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MAKGMRVKLNYAVSRDPDTGAEITRLTPPEVTCHRNYFYQKCFFNDGSHLLFAGEFDGHW
NYYLLNIATAEAVQLTEGAGDNTFGGFLSPDDSALYYVKNDRTLLEVNLSTLQERQVYRV
PDEWVGYGTWVANSDCSKLVGIEIAKSDWTPLNDWQIFHDFFHKGPHCRLLRVDLQSGES
RVIHEEKKWLGHPIYRPFDDNTVAFCHEGPHDLVDARMWMVNEDGSHVRKVKEHAEGESC
THEFWVPNGSALIYVSYLKGQQGRTIYRFDPDTGINTALMPMPACSHLMSNFDGTLLVGD
GSGTPVDVKDTSGYTIDNDPYLYVFDVAKQAYFRVARHDTSWATVANSRQVTHPHPSFTP
DDGAILFSSDKDGKPAIYIAKLPAHPEMLQA
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaggcatgcgggtaaaattgaattatgcagtcagtcgcgatccggataccggc
gcggagatcacccgcttaacccctccggaagtaacctgtcatcgtaactatttctatcag
aagtgtttttttaatgatggcagccacctgctgttcgccggcgagtttgatggccactgg
aactactatctgttaaatatcgcgacagccgaggccgttcagctcaccgaaggcgccggc
gataataccttcggcggttttctctcaccggatgactccgcgctctattacgttaaaaac
gaccgtacgctgctggaagtcaacctttcaaccctccaggaacgtcaggtctaccgcgtc
ccggatgagtgggtcggatacggtacctgggtcgccaacagcgactgcagcaaactggtc
ggtattgagattgcgaaaagcgactggacgccgctcaacgactggcagattttccacgac
ttcttccataaaggtccgcactgccgtctgctgcgcgtcgacctgcaaagcggcgagagc
cgcgttattcatgaagagaaaaaatggctgggccatcctatctaccgtccgttcgacgac
aacaccgtcgccttctgccatgaagggccgcacgatctggtcgacgcccggatgtggatg
gtcaacgaagatggcagccacgtacggaaagtcaaagagcatgccgagggtgaaagctgt
acccacgaattctgggtcccgaacggttctgcgctgatttatgtctcttatctgaaaggt
caacagggacggacgatttatcgcttcgatccggataccggcatcaataccgcgctgatg
ccgatgcccgcctgctcgcatctgatgagcaatttcgacggcacgctgttagtcggggat
ggctctggtacgccggtggatgtgaaagataccagcggttacaccattgataatgaccct
tatctctatgtctttgatgtcgcgaaacaggcttacttccgcgttgcccggcatgatacc
tcctgggcgacggtcgccaatagccgtcaggtcacccatccgcatccttcgtttacgccg
gacgatggcgcaatcttgttcagctcggacaaagacggaaaaccggctatctacatcgcg
aaactgccagcgcatccggagatgctgcaggcgtaa
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