Raoultella planticola: B1209_06190
Help
Entry
B1209_06190 CDS
T05298
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rpln
Raoultella planticola
Pathway
rpln00260
Glycine, serine and threonine metabolism
rpln00460
Cyanoamino acid metabolism
rpln00630
Glyoxylate and dicarboxylate metabolism
rpln00670
One carbon pool by folate
rpln00680
Methane metabolism
rpln01100
Metabolic pathways
rpln01110
Biosynthesis of secondary metabolites
rpln01120
Microbial metabolism in diverse environments
rpln01200
Carbon metabolism
rpln01230
Biosynthesis of amino acids
rpln01240
Biosynthesis of cofactors
rpln04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rpln00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
B1209_06190
09102 Energy metabolism
00680 Methane metabolism
B1209_06190
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
B1209_06190
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
B1209_06190
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
B1209_06190
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
B1209_06190
Enzymes [BR:
rpln01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
B1209_06190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
AUV52480
LinkDB
All DBs
Position
1263820..1265073
Genome browser
AA seq
417 aa
AA seq
DB search
MLKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPHSGSQANFAVYTALLQPGDTVLGMN
LAQGGHLTHGSPVNFSGKLYNIIPYGIDESGKIDYADMAKQAQEHKPKMIIGGFSAYSGI
VDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLIL
AKGGSEELYKKLNSAVFPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVE
VFLNRGYKVVSGGTENHLFLLDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTS
GIRIGSPAVTRRGFKEAEVKELAGWMCDVLDNINDEAVIERVKGKVLDICARFPVYA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcgtgaaatgaacattgccgattatgatgccgaactgtggcaggctatggag
caggaaaaagtacgtcaggaagagcacatcgaactgatcgcctccgagaactacaccagt
ccgcgtgttatgcaggcacagggttctcagctgaccaataaatatgccgaaggttatccg
ggcaagcgctactacggcggttgcgaatatgtagatatcgttgaacaactggcgattgac
cgtgcaaaagagctgttcggcgctgactacgctaacgtacagccgcactccggctcccag
gctaacttcgcggtctatactgctcttctgcaaccgggcgataccgttctgggtatgaac
ctggcgcagggcggtcacctgactcacggctccccggttaacttctcaggcaaactgtac
aacatcattccttacggcatcgatgagtccggcaaaatcgactatgcagacatggcgaag
caggctcaggaacataagccgaaaatgatcatcggtggtttctctgcttactccggtatc
gttgactgggcaaaaatgcgtgaaatcgctgacagcatcggcgcatacctgttcgtcgat
atggcccacgttgctggcctgattgcggcgggcgtttacccgaacccggtgccacatgct
cacgttgtgacgaccactacccacaaaaccctggcgggtccgcgcggcggcctgatcctg
gcgaaaggcggtagcgaagagctgtacaaaaaactgaattctgccgtattccctagcgct
cagggcggccctctgatgcacgttatcgcgggtaaagcggttgcgctgaaagaagcgatg
gagccagagttcaaagtctaccagcagcaggtggcgaaaaacgctaaagcgatggttgaa
gtgttcctgaatcgcggctacaaagtggtttctggcggtactgaaaaccacctgttcctg
ctggatctggtcgataaaaacctgaccggtaaagaagctgacgctgcgctgggccgtgct
aacatcaccgtcaataaaaacagcgtaccaaacgatccgaagagcccgtttgtgacctcc
ggtatccgtatcggttctccggcggtaacccgtcgcggctttaaagaagcggaagtgaaa
gagctggccggctggatgtgcgatgtgctggacaacatcaatgacgaagcggtcattgag
cgcgtgaagggtaaagtgctggatatctgtgcacgcttcccggtttatgcgtaa
DBGET
integrated database retrieval system