Raoultella planticola: B1209_08955
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Entry
B1209_08955 CDS
T05298
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
rpln
Raoultella planticola
Brite
KEGG Orthology (KO) [BR:
rpln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpln03400
]
B1209_08955
DNA repair and recombination proteins [BR:
rpln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
B1209_08955
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
AUV52926
LinkDB
All DBs
Position
1872219..1872710
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AA seq
163 aa
AA seq
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MDVHDKNTRSKNMRAIGQRDTAIEKRLAALLAQGGFTFTVQDATLPGRPDFVVAEYRCVI
FTHGCFWHHHRCYLFKVPATRTEFWLDKIGKNVARDSRDILRLQERGWRVLIVWECALRG
RLKLSDKALSERLEEWICGGGDRAQIDTLGIGELQLTSPPHKA
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
gtggacgtccacgataaaaacacgcgcagtaaaaacatgcgggcgattggccagcgcgat
acggcaatcgaaaaacggctcgccgcgctgctcgctcagggcggatttacgtttactgtt
caggatgcgactttgccggggcgtcccgattttgtcgtggcagagtaccgctgcgtgatt
tttacccacggctgtttctggcatcaccatcgttgctatctgtttaaagtgcccgcgacg
cgcacggaattctggttggataaaatcggcaagaacgtcgcgcgcgatagccgcgatatc
ctgcggttgcaggagcgagggtggcgggtgctgatcgtctgggaatgtgcgctgcgcggg
cgactaaagctgagcgataaggcgttgagtgagcgcctggaagagtggatctgcggcggt
ggtgaccgcgcgcagatcgacacgctgggcattggtgagctacagcttacttctccacct
cacaaggcgtaa
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