Raoultella planticola: B1209_10580
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Entry
B1209_10580 CDS
T05298
Name
(GenBank) transcriptional regulator
KO
K03746
DNA-binding protein H-NS
Organism
rpln
Raoultella planticola
Brite
KEGG Orthology (KO) [BR:
rpln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rpln03036
]
B1209_10580
03400 DNA repair and recombination proteins [BR:
rpln03400
]
B1209_10580
Chromosome and associated proteins [BR:
rpln03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
B1209_10580
DNA repair and recombination proteins [BR:
rpln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
B1209_10580
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
DUF3037
PaaX_C
DUF6280
DUF6626
TetR_C_24
SpoIIIAH
Motif
Other DBs
NCBI-ProteinID:
AUV53184
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Position
complement(2197187..2197594)
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AA seq
135 aa
AA seq
DB search
MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEESAAAAEIEERTRKLQQ
YREMLIADGIDPNELLSTMAAVKAGTKAKRAARPAKYSYVDENGETKTWTGQGRTPAVIK
KAMDEQGKTLDDFLL
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcacttaaaattttgaacaacatccgtactcttcgtgcgcaggcaagagaa
tgcacccttgaaacgctagaagaaatgctggaaaaattagaagttgtcgttaacgaacgt
cgcgaagaagaaagcgctgcagctgcagaaattgaagagcgtactcgtaaactgcaacaa
taccgtgaaatgctgattgcagatggtattgatccgaacgaactgctgagcaccatggcg
gcagtcaaagcgggtaccaaagctaaacgcgctgcgcgcccggctaaatacagctacgtt
gatgaaaacggcgaaaccaaaacctggacaggtcaaggccgcaccccggcagtgatcaaa
aaagccatggatgagcagggtaaaaccctggacgatttcctgctgtaa
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