Raoultella planticola: B1209_15530
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Entry
B1209_15530 CDS
T05298
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
rpln
Raoultella planticola
Brite
KEGG Orthology (KO) [BR:
rpln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpln03016
]
B1209_15530
Enzymes [BR:
rpln01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
B1209_15530
Transfer RNA biogenesis [BR:
rpln03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
B1209_15530
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
ODP
Motif
Other DBs
NCBI-ProteinID:
AUV53975
UniProt:
A0A2X2EI58
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All DBs
Position
3227239..3229173
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRVEGVVKGTEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
SAVIHTEKERESAEPEELIEPFLTRFVGKVHKKDDRLSIVPDHPLLKDAIPCRADRSVSH
DFKEGDWAVAEMRRHPLKGDRGFYAELTQFITFSDDHFVPWWVTLARHNLEKEAPDGVAT
EMLDEGLERRDLTALDFVTIDSASTEDMDDALYVEAAADGTLHLTVAIADPTAWIAEGSK
LDKAAKIRAFTNYLPGFNIPMLPRELSDDLCSLRANEVRPVLACRMILTADGTIEDDIEF
FAATIESKARLAYDNVSDWLENTGSWQPESESIAQQIKLLQDVCLRRSEWRKTHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDKLGFGVYNVHTGFD
PANTEQLATLLKTHDVHVDPVEVLTLDGFCKLRRELDAQPSGFLDSRIRRFQSYAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAIIKGETATRPQDEIAVQMAERRRLNRM
AERDVGDWLYARYLSPQAGTDTRYAAEIIDISRGGMRVRLVDNGAVAFIPAPFLHAVRDE
LVCSQENGTVQIKGETVYKVTDVIDVKIAEVRMETRSVIARPFA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggacaacccgctgctagcgcagcttaaacagcaactgcattcccagactcct
cgtgttgaaggggtcgttaaggggacggaaaaaggttttggcttcctcgaagttgatgcg
cagaaaagctactttattccgccgccgcaaatgaaaaaagtgatgcatggcgaccgcatc
agcgccgtgatccacactgaaaaagaacgtgaaagcgccgagccggaagagttgattgaa
cctttcctgacccgtttcgtcggtaaagtgcataagaaagatgaccgactgtcgatcgtt
cccgatcatccgctgctgaaagacgccataccctgccgcgccgatcgtagcgtgagccat
gattttaaagagggtgactgggccgttgctgaaatgcgccgtcatccgctgaaaggcgac
cgcggcttttatgccgaattaacccagtttattaccttcagcgacgatcatttcgttccg
tggtgggttaccctggctcgccacaatctggaaaaagaagcaccggacggcgttgcgacc
gagatgctggatgagggtctggaacgtcgtgacttaacggcgctggacttcgttaccatc
gacagcgccagtaccgaagatatggacgatgcgctgtatgtcgaagccgccgccgacggc
acgctgcatttgaccgtagcgattgccgatccgaccgcctggattgccgaaggtagcaaa
ctggacaaagcggcaaaaattcgcgccttcaccaactatctgccgggctttaacatcccg
atgttgccgcgcgagctgtctgacgacctgtgctctctgcgcgccaacgaagtgcgtccg
gtcctcgcctgccgcatgatcctgacggctgacggcacgattgaagacgatatcgaattc
ttcgccgcgaccattgagtcaaaagccagactggcctacgacaacgtctctgactggctg
gaaaacaccggcagctggcagcctgagagcgagtctatcgctcaacagatcaaactgctg
caggatgtctgtctgcgccgcagcgaatggcgtaaaacccatgcgctggtgtttaaggac
cgtccggactaccgtttcgtgctgggtgagaaaggcgaggtgctggatatcgttgccgaa
ccgcgccgcatcgccaaccgcatcgtcgaagagtcaatgattgcggcaaacatctgcgcg
gcccgcgttctgcgcgacaagctgggctttggtgtctataacgtgcataccggctttgat
ccggccaacaccgaacaactggccacgttgctgaagacccacgacgtccacgttgatccg
gttgaagtgctgacgctcgacggtttctgcaaactgcgtcgcgagcttgatgcccagccg
tcgggtttcctcgacagccgcattcgtcgcttccagtcctacgcggaaatcagcaccgaa
ccgggtccgcacttcggccttggccttgaagcctatgccacctggacctcaccgattcgt
aaatatggcgacatgattaaccatcgtctgctgaaagcgatcatcaaaggtgaaacggca
acgcgtccgcaagatgagattgccgtacagatggccgagcgccgtcgcctgaaccgcatg
gccgaacgcgatgttggtgactggctgtacgcccgttatctgagcccgcaggcaggtacc
gatacgcgctatgccgcggaaattatcgatatcagccggggcggaatgcgcgttcgcctg
gtggataacggcgccgtagcctttatcccggcaccgttcctgcacgccgttcgtgatgag
ctggtctgtagccaggaaaacggtaccgtgcagatcaaaggcgagaccgtctacaaagtt
accgacgtcatcgacgtcaagattgccgaagtccggatggaaacccgcagcgtcatcgcg
cgtccgttcgcctga
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