Raoultella planticola: B1209_17940
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Entry
B1209_17940 CDS
T05298
Name
(GenBank) L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
rpln
Raoultella planticola
Brite
KEGG Orthology (KO) [BR:
rpln00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rpln01002
]
B1209_17940
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rpln01011
]
B1209_17940
Peptidases and inhibitors [BR:
rpln01002
]
Cysteine peptidases
Family C82
B1209_17940
Peptidoglycan biosynthesis and degradation proteins [BR:
rpln01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
B1209_17940
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Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AUV54362
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Position
complement(3701388..3703178)
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AA seq
596 aa
AA seq
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MLLKKRYGRQLSALSLSLAFAFAPLFNAQAEEPEIVPTDSSATMGELSSALTQSDGQSAT
VAKMAGEQPLAAGAAEKSRAAITAQLPAGYQPVFMNPLVSLYAARDMKPMWENRGAVQAF
QQQLAEVAIAGFQPQFTTWVSLLTDPAVSGMARDIVLSDAMMGYLHFISGIPVQGNRWLY
GTKPYTMATPPLSVINQWQLALDNGSLVPFIAGLAPKHPQYEAMHRALLALVADSRPWPQ
LTSNASLRPGEWSNDIGALREILQRNGMLDDSAKITLPGDVVSPSAGKKSKTAARGVYDR
QLVEGVKRFQAWQGLGADGVIGQSTRDWLNVSAAQRAGVLALNIQRLRLLPGKLSTGIMV
NIPAFSLVYYQDGSQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPK
VRNDPGYLEQHGYTVMRGWNSKEAIDPYRVDWSTITENNLPFRFQQAPGARNSLGRYKFN
MPSSDAIYLHDTPNHNLFQKDVRALSSGCVRVNKASELANMLLQDAGWNDTRISDALKQG
DTRYVNIRQNIPVNLYYLTAFVDADGRMQYRTDIYNYDLTARSGAQILAKAEQLIR
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgttgctaaaaaaacgctatggtcgtcaattgtcagcgctgagtttgagcctggcattt
gcatttgctccactgtttaatgcccaggccgaagagcctgaaatcgtacccacagacagt
tctgcgacgatgggggagctgtcgtctgcgcttacccagagcgatggtcagtccgcgacg
gtcgcgaaaatggccggggaacagccgctggctgccggcgccgcagaaaaaagtcgcgcc
gcgataacggcacagctgccggccggctatcagcccgtgtttatgaacccgctggtgtcg
ctctatgcggccagagatatgaagccgatgtgggagaaccgcggggcggttcaggctttc
cagcagcagctggctgaggtcgccatcgccggttttcaaccgcaatttaccacctgggta
agtctgttgaccgatccggcggtaagcggtatggctcgcgacatcgtgctctccgacgcc
atgatgggatacctgcattttatcagcggtattccggtgcaagggaaccgttggctgtac
ggaacgaagccgtacaccatggcgaccccgccgctgtcggtgattaaccagtggcagctg
gcgctggataatggctctctggtgccgtttattgccggactggcgccgaagcatccgcag
tatgaggcgatgcatcgggcgctgctggcgctggtggccgattcccgtccgtggccgcag
ctgaccagcaacgcgtcgctacgtccaggagagtggagtaacgacattggcgcgctgcgc
gaaattttacagcgcaacggtatgcttgatgattccgcgaaaattactctgccgggggat
gttgtcagtccatctgccgggaagaagagtaaaaccgcggcgcgcggcgtctacgatcgc
cagcttgttgagggcgttaagcgcttccaggcctggcaggggctgggcgccgatggcgtg
attggtcaatccacccgtgactggctcaacgtttccgcggcccagcgcgccggcgtgctg
gcgctgaacattcagcgcttgcgtctgctgccgggaaaactgtctaccggcatcatggtc
aatattccggccttctcgctggtctattaccaggatggcagccaggtgctggcatcgcga
gtgattgtcgggcggccggatcgtaaaacgccgatgatgagcagcgcgctaaacaacgtg
gtggttaacccgccgtggaacgtaccgccgacgctggcgcgcaaagatatcctgccgaag
gtgcgtaacgatccgggctatcttgagcagcatggttacaccgtgatgcgcggctggaac
agcaaagaggctatcgacccgtatcgggttgactggtcgacgatcaccgaaaacaatctg
ccgttccgttttcagcaggcgcctggcgcgcgtaactcattggggcgctataagtttaat
atgcccagctccgatgctatctatctgcacgatacgccgaaccacaatctgttccagaaa
gacgtgcgggccttaagctccggctgcgtgcgggtcaacaaagcctcggagctggcgaat
atgctgctgcaggatgccggctggaacgacacgcggatttccgatgcgctcaagcagggc
gatacccgctatgtcaatatccgccagaatatcccggtcaatctctattacttgaccgcc
ttcgtcgatgcggatggccgcatgcaatatcgcacagatatttacaattacgatctcacc
gcgcgatctggcgcacaaattctggcgaaagcagaacaattaatcaggtaa
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