Raoultella planticola: B1209_19115
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Entry
B1209_19115 CDS
T05298
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rpln
Raoultella planticola
Brite
KEGG Orthology (KO) [BR:
rpln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpln03400
]
B1209_19115
Enzymes [BR:
rpln01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
B1209_19115
DNA repair and recombination proteins [BR:
rpln03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
B1209_19115
Prokaryotic type
B1209_19115
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AUV54551
UniProt:
A0A2C5UQK6
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All DBs
Position
complement(3956086..3957528)
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AA seq
480 aa
AA seq
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MATHLVWFRADLRIHDNQALAAACRDPHARVLALFIATPGQWHQHGMAPRQAAFIVRHLR
SLQSALAERGIALQVAEAEDFSASVQLLADYCAQQQVSHLFYNYQYEINERQRDAAVEKR
LSGVVCHGFDDALLLSPGSVLTGNHEMYKVFTPFKNAFLRRLREALPECVAAPTVRGHGP
LTPAPLPEIGYPQEAFDPHLFAEDEKTAIARLRRFCQQQAADYDLQRDFPATEGTSRLSP
CLAVGVLSPRQCLHRLLAEQPAALDGEAGSVWLNELIWREFYRHLMVFYPDLCKGRPFIA
WTDNVTWRDDVQGLEAWQAGKTGFPIVDAAMRQLNATGWMHNRLRMIAASFLVKDLRIDW
RAGERYFINRLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGEKFDKGGAFIRQWL
PELADVPDKALHQPWIWADKQRVSLNYPRPLVDHKQARLETLAAWEAASKSLTPRPGRGS
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggccactcatctggtttggtttcgcgctgacttacgtatccatgacaaccaggcgctt
gccgccgcctgtcgcgatccgcatgcccgcgtgctggcgctgtttatcgccacgccgggc
cagtggcatcagcacggtatggcgccgcggcaggcggcttttatcgtccgccatctgcgt
agcctgcagtcagccctcgccgagcgaggaattgcgttgcaggtggcggaggcggaggat
ttttcggccagcgtccagctgctggctgactattgcgcgcagcagcaggtcagccacctg
ttttataactatcagtacgaaattaacgaacggcagcgcgatgccgcggtggaaaagcgg
ctgagcggcgtggtgtgtcacgggtttgacgatgcgcttttactgtctcctggcagcgtg
ctgaccgggaatcacgaaatgtataaggtgtttactccctttaaaaacgcttttctccgt
cgactgcgtgaggcgctgccggagtgcgtggccgcaccaacggtgcgcggccacggcccg
ctgacgccagcgccgctgccggagattggctatccgcaggaggcttttgatccccacctt
tttgccgaggatgagaaaacggctatcgcccgactgcgccgtttctgccagcagcaagcc
gccgattatgacctgcagcgtgattttcccgccacggaaggcaccagtcggctgtcgcca
tgtctggccgtgggggtactttccccgcgccagtgcctgcatcgactgctggctgagcag
cccgcagcgctcgacggtgaagcaggctccgtctggctgaacgaactgatctggcgggag
ttttaccgacatttgatggtgttctacccggacttatgcaaagggcgcccgtttattgcc
tggaccgataacgtgacatggcgggacgatgtgcaaggattagaggcgtggcaagccggg
aaaacgggttttccgatcgtcgatgccgctatgcgccagctcaatgccacggggtggatg
cataatcggctgcggatgattgccgccagttttctggtcaaggacctgcgcatcgactgg
cgcgcgggcgagcgctattttatcaaccggctgattgacggcgacctggcggcgaataac
ggcggctggcagtgggcagcttcgacaggcaccgacgccgccccttattttcgtatattt
aatccgaccacccagggagagaagtttgataagggcggggcgtttattcggcaatggctg
cctgagctggcagatgtccctgataaggcgctgcatcagccgtggatttgggccgataaa
cagagggtgagcctgaactatccgcgtccgctggtcgatcacaagcaggcgcggctggag
acgctggcggcctgggaggccgccagtaaaagccttactccacggccagggcgcgggtcc
tga
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