Raoultella planticola: B1209_21480
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Entry
B1209_21480 CDS
T05298
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
rpln
Raoultella planticola
Brite
KEGG Orthology (KO) [BR:
rpln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpln03400
]
B1209_21480
DNA repair and recombination proteins [BR:
rpln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B1209_21480
Archaeal homologous recombinant proteins
B1209_21480
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AUV54925
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Position
4445712..4446914
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AA seq
400 aa
AA seq
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MRIIHTSDWHLGQNFYSKSRAAEHSAFLDWLLTSAQAHEVDAIIVAGDIFDTGSPPSYAR
ELYNRFVVQLQQTGCQLVVLAGNHDSVATLNESRDILAFLKTTVVASAGHAPFILPQRDG
TPGAIFCPVPFLRPRELVTSQAGHSSGEKQQLLLNAISDYYQQQYEAACALRGDRPLPIV
ASGHLTTVGASKSDAVRDIYIGTLEAFPASHFPPVDYIALGHIHRAQKIGGSEHIRYSGS
PIALSFDETGKSKSVNLVTFTDGQLTEVLPLTVPVTQPLAVLKGDFSSISEQLTQWRDAP
QEPVVWLDIEITSDEYLHDIQRKIQAQTEDLPVEALLVRRSRAQRERILAGERRETLSEL
QVEEVFERRLAQETLEEAQQLRLTQLFNETLHSLNGEEHL
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcatccacacctctgactggcaccttggccagaatttttacagcaagagccgc
gccgccgaacactcggcctttctcgactggctgctgaccagcgcgcaggcgcacgaggtc
gatgccattattgtcgccggcgacatctttgataccggctcgccgccaagctacgctcgc
gagctgtataaccgctttgtggttcagcttcagcagaccggctgccagctggtggtactg
gcgggcaaccacgattcggtggcgacgctgaatgaatcccgcgatattctggcctttctg
aaaaccacggtggtggccagcgccggccatgccccctttattctgccgcagcgcgacggc
acccccggcgccatattttgcccggtccccttcctgcgcccgcgcgaactggtcaccagc
caggccggacactccagcggcgaaaaacagcagctgctgttgaacgccatcagcgactat
tatcagcagcagtacgaagcggcctgcgccctgcgcggcgatcgtccgctgccgatcgtc
gccagcggccacctgaccaccgtcggcgccagcaaaagcgatgcggtgcgcgatatctac
atcggcacgctggaggcatttcccgccagccattttccccccgttgattatattgccctc
ggccatattcaccgggcgcaaaagattggcggcagcgaacatattcgctacagcggctcc
cccatcgccctcagctttgatgagacaggaaaaagcaaaagcgtcaatctggtgaccttc
accgacgggcagctgacggaggtgcttcctctgacggtgccggtgacgcagccgctggcg
gtgctgaaaggcgatttctccagcatcagcgaacagctcacccagtggcgggacgcccct
caggagccggtcgtctggctggatattgaaattaccagtgacgaatatctccatgatatt
cagcgcaaaattcaggctcagaccgaagatctgccggtggaagcgctgcttgttcgccgc
agccgcgcccaacgtgaacgcatcctggcgggcgagcggcgggagacgctgagcgaactg
caggtcgaggaggtgtttgaacgccgcctggcgcaggaaacgctggaagaggcgcagcag
ctgcgcctgacgcagctgttcaacgaaacgctgcatagtctgaatggtgaggagcacctg
tga
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