Raoultella planticola: B1209_22145
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Entry
B1209_22145 CDS
T05298
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rpln
Raoultella planticola
Pathway
rpln03030
DNA replication
rpln03430
Mismatch repair
rpln03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B1209_22145
03430 Mismatch repair
B1209_22145
03440 Homologous recombination
B1209_22145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpln03032
]
B1209_22145
03400 DNA repair and recombination proteins [BR:
rpln03400
]
B1209_22145
Enzymes [BR:
rpln01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B1209_22145
DNA replication proteins [BR:
rpln03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B1209_22145
DNA repair and recombination proteins [BR:
rpln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B1209_22145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AUV55016
UniProt:
A0A2X2ET66
LinkDB
All DBs
Position
complement(4578849..4582331)
Genome browser
AA seq
1160 aa
AA seq
DB search
MSEPRFVHLRVHSDYSMIDGLAKTGPLVKKAASLGMPALAITDFTNLCGLVKFYGAGHGA
GLKPIVGADFHVQSELMGDEFTELTVLAANNVGYQNLTLLISRAYQRGYGALGPWIDRDW
LAEHQEGLILLSGARKGDVGVSLTRGNMALVDQCLSFYQEHFPDRYYLELIRTGRADEEA
YLHAAVQLAEERGIPVVATNDVRFLETGDFDAHEIRVAIHDGFTLDDPKRPRKYSPQQYM
RSEDEMCELFSDIPEALENTVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDYLVKKSKEGL
EERLAFLFPDPEERVKRRPEYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVRALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEAGLHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINKRRAKNGEPPLDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVQWQHECLKPVLEPTYGIILYQEQVMQIAQELSGYTLGGADMLRRAMGKKKPEEM
AKQRGTFEEGARKNGIDGELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNNGGYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYANCQPWPEQVVLDGERETLGLY
LTGHPINQYLKEIERYVGGVRLKDMHPTDRGKVTTAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaccacgtttcgtccacctgcgggtgcatagcgactattccatgatcgatggg
ctggcaaaaaccgggccgctggtgaaaaaggcggcctcgcttggcatgcctgcgctggcg
atcaccgattttactaacctgtgcggactggtgaagttctacggagcgggacatggcgca
ggtctgaagcccatcgtcggcgcggattttcatgtccagagcgaactgatgggcgatgag
ttcaccgaactcacggttctggcggccaacaatgtgggttatcaaaacctgacgctgctg
atttcacgtgcttatcaacgcggctatggcgcgctggggccgtggattgaccgggactgg
ctggccgaacatcaggaaggactgatcctgctttccggcgcgcgtaaaggcgatgttggc
gtcagcctgacgcgtggcaatatggcgctggtcgatcaatgcctctctttctaccaggag
catttcccggatcgctactatctggagctgatccgcaccggtcgcgccgatgaagaggcc
tatttacacgccgccgtgcaactggctgaagagcgcggtataccggtcgtggcgactaat
gatgtgcgtttcctggaaaccggtgatttcgatgcgcatgagatccgcgtcgcgattcat
gacggctttaccctggacgatccgaagcgcccgcgcaaatactcgccgcagcaatatatg
cgcagcgaagatgaaatgtgtgagctgttctccgatattccggaagcgctggaaaatact
gtcgaaatcgccaagcgctgcaacgttaccgtgcgtcttggcgaatacttcctgccgcag
ttcccgaccggggatatgacgacggaagattatctggttaaaaaatcaaaagagggcctg
gaagagcgtctggctttcctgttccctgatcctgaagagcgcgttaaacgccgacctgaa
tacgatgagcgactggatatcgaacttcaggtgattaaccagatgggcttccccggttac
ttcctgatcgtcatggagtttatccagtggtccaaggataacggcgtaccggtagggccg
ggacgtggttccggcgccgggtcgttagtcgcctacgccttaaaaatcaccgacctggat
ccgctggaattcgatctgctgttcgaacgtttcctgaaccctgaacgtgtatcgatgccc
gactttgacgtcgacttctgcatggagaagcgcgatcaggttatcgagcacgtggcggag
atgtacggtcgcgatgcggtatcgcagattatcaccttcggtacgatggcggcgaaagcg
gttattcgcgacgtgggccgcgtgcttggccatccgtacgggttcgtggatcggatctcg
aaactggtgccgcccgacccggggatgacgctggcgaaagcgtttgaggccgagccgcag
ctgccggagatctacgaagctgacgaagaggtcagagcgctgatcgacatggcgcgtaag
ctggaaggcgtcacgcgtaacgccggtaagcatgcggggggcgtggttatcgccccgacc
aaaattaccgacttcgccccgctatattgcgatgaagcaggtttgcatccggtcacccag
tttgataagaacgacgtcgaatacgccgggctggtgaagttcgacttccttggcctgcgt
acgttgaccatcatcaactgggcgctggagatgatcaacaagcggcgggcgaagaacggc
gagccgccgctggatatcgcggcgatcccgctggacgataagaaaagcttcgatatgctg
caacgctcggaaaccactgcggttttccagcttgaatcgcgcggcatgaaagacctgatt
aaacgccttcagcccgactgcttcgaagatatgatcgcgctggtggccctgttccgtccg
gggccgctgcaatcggggatggtagataactttatcgaccgtaagcacggccgcgaagag
atctcttacccggacgtacagtggcagcatgagtgtctgaaaccggtgcttgagccgacg
tatggcattatcctgtatcaggaacaggtcatgcagattgcccaggagctctcgggctat
accctcggcggcgcggatatgctgcgtcgtgcgatgggtaagaaaaagccggaagagatg
gccaagcagcgcggcacctttgaggaaggggcgaggaaaaacggcattgacggcgagctg
gcgatcaaaatctttgacctggtggagaaattcgccggttacggatttaacaaatcgcac
tcggcggcctatgcgctggtctcctaccagacgctgtggctgaaagcgcactatccggcc
gagtttatggcggcggtgatgaccgcggatatggataacaccgagaaagtggtggggctg
gtcgacgagtgctggcggatgggcctgaaaatcctgccgccggatattaactccggtctg
taccatttccacgtgaatgacgacggtgaaatcgtctacggtatcggcgcgattaaaggg
gtcggcgaagggccgatcgaagccattattgaagcgcgtaacaacggcggttatttccgc
gagttgttcgatctttgcgcccgcactgataccaaaaagctgaaccgtcgggtgctggaa
aaactgattatgtccggggcgtttgaccgcctcgggccgcatcgcgcggcattaatgaat
tcgctgggcgatgcgctgaaggccgccgatcagcatgcgaaagccgaggcgattggccag
gcggatatgttcggggtgctggcggaagagccggagcaaatcgagcaatcctatgccaac
tgccagccgtggccggagcaggtggtgctggatggtgaaagggagaccctggggctgtac
ctgacgggtcatcctatcaaccagtatttgaaagagattgagcgctatgttggcggcgtg
agactcaaagacatgcatccgaccgatcgtggtaaagtcaccacggcggcggggctcgtt
attgctgcgcgggtaatggtcaccaagcgcggcaatcgtatcggtatctgtacgttggat
gaccgttccgggcgtctggaggtgatgttatttaccgacgcgctggataaatatcagcaa
ttgctggaaaaagaccgcatacttatcgtcagcggacaggtcagctttgatgacttcagc
ggggggcttaaaatgaccgcccgtgaagtcatggacattgacgaagcccgggaaaaatat
gctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccaccgttcgggaaccattccagtacacctctattatcag
agggcggatgcgcgcgcgcggctgcgttttggcgcaacatggcgcgtctctccgagcgat
cgtttactcaacgatctgcgtggccttatcggctcggagcaggtggaactggagtttgac
taa
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