Raoultella planticola: B1209_22875
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Entry
B1209_22875 CDS
T05298
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
rpln
Raoultella planticola
Brite
KEGG Orthology (KO) [BR:
rpln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rpln03021
]
B1209_22875
Transcription machinery [BR:
rpln03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
B1209_22875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
AAA_34
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AUV55146
UniProt:
A0A443VUC6
LinkDB
All DBs
Position
4742167..4745073
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AA seq
968 aa
AA seq
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MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPAIGENRLYARNDSPITRVMFNPGDT
ITSHEGWQLQVDEVNEENGLLAYTGTRLDTEETNVTLREVLLDSKLVFSKPQDRLFAGQI
DRMDRFALRYRARKYQSEQYRMPWSGLRGQRTSLIPHQLHIAHDVGRRHAPRVLLADEVG
LGKTIEAGMILHQQLLAGAAERVLIIVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQH
DAYNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDLMIVDEAHHLVWSEEAPSREYQAIE
QLAERVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQQNYRPVADAVALLL
AGNKLSDTELNTLGDLIGEQDIEPLLQAANSDRDDAQAARQELVSMLMDRHGTSRVLFRN
TRNGVKGFPKRELHTIRLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGD
TGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSI
IERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLERTAQSVLVRWYHEGLDAFEHTCPTGRTVYDSVHNELINYLAAPETS
EGFDELIKACRQQHDALKAQLEQGRDRLLEIHSNGGEQAQKLAESIEEQDDDTNLIAFAM
NLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFVTWE
HPLIINGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLNRFLPATP
VRMLLDKNGNNLAGQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQLGEAQVAKAAQ
ALIDAARDEANDKLSAELSRLEALKAVNPNIRDDELAAIESNRQQVMDALAQAGWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggattagcgacacagagagcgaactgggattaggg
acggtagttgcgctggatgcgcgtatggtgaccttgcttttccccgccatcggcgaaaac
cgtctgtacgcgcgcaatgattccccgatcacccgcgtgatgtttaacccgggtgatacc
atcaccagccatgaaggctggcagctccaggttgacgaagttaatgaagaaaacggcctg
ctggcctacaccggtacccgtctcgataccgaagaaaccaacgtcacgctgcgcgaagtg
ctgctcgacagcaaactggtgttcagcaaaccgcaggaccgcctgttcgccggtcagatc
gacaggatggaccgttttgcgctgcgctaccgcgcccgcaaataccagagcgagcagtat
cggatgccgtggagcggcctgcgcggacagcgcaccagcctgattccccaccagctgcat
atcgcccatgatgtcggccgtcgccacgcgccgcgcgtcctgctggccgatgaagtcggt
ctgggtaaaaccatcgaagccgggatgattctgcatcagcagctgcttgccggcgccgcc
gaacgcgtgctgatcatcgtcccggaaaccctgcagcatcagtggctggtcgagatgctg
cgccgcttcaacctgcgtttctcgctgtttgacgatgagcgttatgccgaagcccagcac
gatgcctataacccgttcgagaccgaacagctggtgatctgctcgctggatttcgtgcgc
cgcagcaagcagcgtcttgagcacctgtgcgatgccgaatgggacctgatgatcgtcgat
gaagcgcaccacctggtgtggagcgaagaggcgccgagccgcgaatatcaggcaatcgag
cagctggccgaacgtgtgccgggcgtgctgctgctgaccgctacgccggaacagctgggt
atggaaagccacttcgcccgtctgcgcctgctggatcccaaccgcttccacgatttcgag
cagttcgttgaagaacaacagaattaccgcccggtggccgatgccgtcgccctgctgctg
gctggcaacaagctgagcgataccgagctgaacaccctcggcgatctgatcggcgagcag
gatatcgaaccgctgctgcaggccgctaacagcgatcgcgacgacgcccaggccgctcgc
caggagctggtctcgatgctgatggatcgccacggcaccagccgcgtgctgttccgtaat
acccgtaacggcgtcaaaggcttcccgaaacgcgagctgcacactattcgtctgccgctg
cccacccagtatcagacggcgattaaagtctccggcattatgggggcgcgtaaaaccgcg
gaagagcgcgcgcgcgacatgctctatccggagcagatttatcaagaatttgaaggtgat
accggtacatggtggaacttcgacccgcgcgttgagtggctgatgggctatctcaccagc
caccgctcgcagaaagtgctggtgatctgtgcgaaagcggccaccgcccttcagctggag
caggttctgcgcgagcgcgaagggatccgcgcagcggtcttccatgaaggtatgtccatc
attgagcgcgaccgtgccgccgcatggttcgccgaagaagataccggcgcccaggtgctg
ctgtgttctgaaattggctccgaaggccgtaacttccagtttgccagcaacctggtgatg
ttcgatctgccgttcaacccggatctgctggagcagcgtattggccgtctcgaccgtatc
ggtcaggcgcacgatattcagatccacgttccgtatctggaaagaaccgcgcagtccgta
ctggttcgctggtaccacgaagggcttgatgcgtttgaacatacctgcccgaccggtcgc
accgtgtacgacagcgtgcacaacgaactgattaattatcttgccgcaccggaaaccagc
gaaggcttcgatgagctgatcaaagcctgccgccagcagcacgatgcgctgaaagcacag
ctggaacaggggcgcgatcgcctgctggagattcactccaacggcggcgaacaggcgcag
aagctggccgaaagcattgaagagcaggatgacgataccaacctgatcgcctttgccatg
aacctgtttgatattgtcggcatcaaccaggacgatcgcggcgaaaacctgatcgtgctg
acgccatccgaccatatgctggttccggacttcccgggtctgccggaagacggctgcacc
atcacctttgaacgtgatgtcgcgctgtcccgcgaagatgcgcagttcgtcacctgggag
cacccgctgattatcaacggtctggacctgatcctttccggcgataccggcagcagcact
atctcactgctgaagaacaaagcgctgccggtcggtacactgctgctggagctgatttac
gtggtggaagctcaggcgccgaagcagctgcagcttaaccgcttcctgccggcgacgccg
gtgcgcatgctactggataaaaacggcaataacctcgccggtcaggtggagtttgaaagc
ttcaaccgccagctgagcgccgtcaaccgccataccggcagcaaactggtcaacgcggtg
cagcaggacgtgcatgcgatcctccagctcggcgaggcgcaggttgccaaagccgcgcag
gcgctgatcgacgcggcccgcgatgaagccaacgacaagctgtcggcggaactctctcgt
ctggaagcattaaaagcggttaacccgaacatccgcgacgatgaacttgctgcgattgag
agcaaccgtcagcaggtgatggacgcgctggcgcaggcgggctggcgtctcgatgcgctg
cgcttaatcgtggtcacccaccagtaa
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