Raoultella planticola: B1209_24290
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Entry
B1209_24290 CDS
T05298
Name
(GenBank) trehalose operon repressor
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
rpln
Raoultella planticola
Brite
KEGG Orthology (KO) [BR:
rpln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rpln03000
]
B1209_24290
Transcription factors [BR:
rpln03000
]
Prokaryotic type
Helix-turn-helix
LacI family
B1209_24290
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
HTH_23
HTH_31
HTH_IclR
HTH_3
Peripla_BP_4
HTH_7
MarR_2
HTH_Tnp_ISL3
AAA_18
SpoIIID
HTH_Crp_2
CENP-B_N
MarR
HTH_26
HHH
HTH_28
TrmB
Motif
Other DBs
NCBI-ProteinID:
AUV55390
UniProt:
A0A2C5UT91
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All DBs
Position
5035432..5036379
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AA seq
315 aa
AA seq
DB search
MQNRLTIKDIARLSGVGKSTVSRVLNNESGVNERTRERVEAVMQQHGFSPSRSARAMRGQ
SDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSPALVGEHLGILARRNID
GVVLFGFTGITEEMLTPWRESMVLLARDAPGFASVCYDDNGAVNMLMQRLYDGGHRHISF
LGVPHSDVTTGQRRHQAYLNFCEQHQLTPSAALPGLAMKQGYENVASVLTPDTSALLCAT
DTLALGASKYLQEQRIGHLQVASVGSTPLMKFLHPEILTVNPGYAEAGRQAAQQLIAQIG
GQAEPRQIVIPAALI
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaccggctgaccatcaaagatatcgcgcgcttaagcggcgtcgggaaatcgacg
gtatcccgcgtgcttaataatgaaagcggcgtcaatgagcgcacccgtgaacgggtcgag
gcggtgatgcagcagcacggcttctcgccctcccgctcagcgcgggcgatgcggggtcaa
agcgataaagtggtcgcgattatcgtcacccgtcttgactcgctgtcggaaaaccttgcc
gtacagacgatgctgcccgccttttacgagcagggttacgatccgattatgatggaaagt
cagttctctcccgcgctggtcggcgagcaccttgggatcctcgcccgccgcaatatcgac
ggcgtggtgctgttcggctttaccggcattaccgaagagatgctgacgccgtggcgggaa
tcgatggtgctgctggcccgcgacgcgccgggattcgcctccgtctgctacgacgacaac
ggcgcggtgaacatgctgatgcagcgtctgtacgatggcggccatcggcatatcagcttc
ctcggggtaccgcatagcgacgtcactaccgggcagcgccgccatcaggcctacctcaat
ttttgcgagcagcaccagttgaccccgtctgccgccctgccgggactggccatgaaacag
ggctatgaaaatgtcgccagcgtgctgacccccgataccagcgcgctgctgtgcgcgacc
gataccctcgccctcggcgccagcaagtatttgcaagagcaacgtattggacatctgcag
gtcgccagcgtcggcagtacgccgctgatgaagttcctccatccggaaatcctgaccgtg
aatcccggttacgccgaggccggtcgccaggcggcccaacagctgatcgcccagatcggc
ggccaggcagaaccacgtcaaatcgtcattcccgccgcgctgatttaa
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