Pararhodospirillum photometricum: RSPPHO_00059
Help
Entry
RSPPHO_00059 CDS
T01851
Name
(GenBank) ATP-dependent DNA helicase, Rep family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rpm
Pararhodospirillum photometricum
Pathway
rpm03420
Nucleotide excision repair
rpm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rpm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RSPPHO_00059
03430 Mismatch repair
RSPPHO_00059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpm03400
]
RSPPHO_00059
Enzymes [BR:
rpm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RSPPHO_00059
DNA repair and recombination proteins [BR:
rpm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RSPPHO_00059
MMR (mismatch excision repair)
Other MMR factors
RSPPHO_00059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
CCG06685
UniProt:
H6SIQ8
LinkDB
All DBs
Position
129484..131727
Genome browser
AA seq
747 aa
AA seq
DB search
MKTRTMDDPFPLDEPSSPAPVAAPAWLETLNPEQREAVTATEGPVLVLSGAGTGKTRVLT
TRLAYILATCRVRPWQVLAVTFTNKAAREMRERATSLIGPDAEQVWLGTFHSLGVRLLRR
HGALVGLRPGFTILDSDDQQRLLKQIMDAERLDLKRWQPQVALSLLQRWKDRGWLPEAVP
ADDPSRSFAEGRLLDLYRQYQDRLMVVNAADFGDLLLHCLTLLTRNPQVLAEVSGQFRYI
LVDEYQDTNVAQYLWLRLLARAHGNLCCVGDDDQSIYSWRGAAVGNILRFEEDFPGATLV
RLESNYRSTSTILAAASGLIRHNQGRLGKELRSGLDTQELGPPIKVWGVWDGAEEARRVV
DEIEARQRAGDALGGMAILVRVGFQTREFEERLIVTGTPYRVIGGPRFYERQEIRDAVAY
LRLAVQPDDSLAFERVVNVPRRGLGEATLQILNRVARLERISLQEAARRVIETDEVRAAA
RNKLRAFLADLSRWRALGDGLDPSSLCATILDESGYVDMWRKDRAPDAEGRVENLKELVG
ALKEFDTLEGFLEHVSLVMDNEARAGEQAVTLMTLHAAKGLEFDTVFLPGWEEDIFPHRR
ALEESGAEGLEEERRLAYVGLTRARRRVYISFAASRRVFADWRSCLPSRFLDELPPETVE
RESASGVYGSGAQGHMDAPGGWGRVQQSPGWGRSSRREAATFQVGQRVVHDSFGVGDVLD
VAGDRLEIVFEGGAVRKVMASFVKAMG
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaccagaaccatggacgatccgtttcccctggacgagccgtcgtctcccgccccg
gtggcggcgcccgcatggcttgagacgctcaatcctgaacagcgcgaggctgtgactgcc
actgagggtcccgtcctggtgctctcgggggccggcaccggtaaaacccgcgtgctcacc
acccggctggcttatatcctcgccacctgccgcgtgcggccctggcaggtgttggccgtg
acctttaccaacaaagcggcccgggaaatgcgcgagcgcgccacgtccttgattggtccc
gacgccgagcaggtgtggttggggacctttcactccctgggagtgcgcttgctgcgtcgc
cacggggccttggtggggctgcgcccgggctttaccatcttggatagcgacgaccagcag
cggctcttgaagcagatcatggacgccgagcggctcgaccttaagcgctggcagccccag
gtcgccttgagtctcctccagcgttggaaggaccggggctggctgcccgaggcggtgccg
gccgacgatccgagccgttcctttgccgaggggcgcctgctcgacctctatcgccagtat
caggaccgcttgatggtggtgaacgccgccgactttggcgatctgttgctgcactgcctc
accctattgacccgcaatccccaggttttggccgaggtcagcgggcaatttcgctatatt
ctggtggatgagtaccaggacaccaatgtcgcccagtatctttggctgcgtttgctggcg
cgggcccatggtaacttgtgctgtgttggcgatgacgaccagtccatttattcctggcgc
ggcgctgctgtgggcaacatcttgcgctttgaggaggatttcccgggggcgaccttggtt
cgcctggagagcaactatcgctcgacctctacgatcttggcggcggcctcgggcttgatc
cgccataaccaggggcgcctcggcaaggagttgcgcagcggcctagatacgcaggagctg
gggccgccgatcaaggtctggggcgtgtgggatggcgccgaggaggctcggcgcgtcgta
gacgagatcgaggcacgccagcgggccggcgatgccctgggcggcatggcgatcttggtg
cgggttggtttccagacccgcgagtttgaagagcgcctgatcgtgaccggcacgccgtat
cgggtgatcggcgggcctcgtttttatgagcgccaggaaatccgggacgccgtggcctac
ctgcgccttgccgtccaacccgacgatagcttggccttcgagcgggtggtcaacgtgccc
cggcgcggtctgggcgaggcgacgctgcaaatcctcaaccgggtggcccgcctggagcgg
atcagcctgcaagaagcggcgcggcgcgtgatcgagaccgatgaagtgcgggcggcggcg
cgcaacaagctgcgggcttttctcgcggacctgtcgcgctggcgggcgctcggcgatggc
ctggatccttccagcttgtgcgccacgattctcgacgaaagcggctacgtcgacatgtgg
cgcaaggaccgtgccccggatgccgaaggccgggtggaaaacctgaaggaactggtcggg
gccctgaaggaattcgacaccctggagggcttcttggagcatgtcagcttggtgatggac
aacgaggcccgggccggcgagcaggcggtgacgctgatgactttgcacgccgccaagggc
ttggagttcgacaccgtgtttcttcccggctgggaagaggacatctttccccatcgccgc
gccttggaagagagcggtgccgagggcctggaggaggagcggcggctggcttacgtgggc
ctgacccgggcccggcggcgggtttacatcagctttgccgcgagccgccgggtgttcgcc
gactggcggtcctgcctgccatcccgctttttggacgaactgccccccgaaaccgtcgag
cgcgaaagtgccagcggggtgtatggctcgggcgcccagggccatatggacgcgccgggt
ggttggggacgggtgcagcaaagccccggctgggggcggtcgtcccggcgcgaggcggcg
actttccaggtgggccagcgggtggtgcacgacagcttcggcgtgggcgatgtgctcgac
gtggccggcgaccgcctggaaatcgtgtttgagggcggcgcggtgcgtaaggtgatggcc
agcttcgtcaaagccatgggctaa
DBGET
integrated database retrieval system
