Pararhodospirillum photometricum: RSPPHO_00282
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Entry
RSPPHO_00282 CDS
T01851
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
rpm
Pararhodospirillum photometricum
Pathway
rpm03030
DNA replication
rpm03430
Mismatch repair
rpm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RSPPHO_00282
03430 Mismatch repair
RSPPHO_00282
03440 Homologous recombination
RSPPHO_00282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpm03032
]
RSPPHO_00282
03400 DNA repair and recombination proteins [BR:
rpm03400
]
RSPPHO_00282
Enzymes [BR:
rpm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RSPPHO_00282
DNA replication proteins [BR:
rpm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RSPPHO_00282
DNA repair and recombination proteins [BR:
rpm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RSPPHO_00282
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
B12-binding_2
DNA_pol3_delt_C
HP_1247_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
CCG06908
UniProt:
H6SN32
LinkDB
All DBs
Position
complement(374612..375646)
Genome browser
AA seq
344 aa
AA seq
DB search
MKLTGAAVQAFLKNPDPQIRVVLVYGPDEGLVRERLDQLLRTVVDDPGDPFRVCELGGDD
LVRDPARLADEAAALSMVGGRRVVRLRDVGDSHTARLKPFFEHPVGEALILVQGGALGPR
SSLRLLVEGSPMAAALPCYADEGRGLETLVRDMLAGAKLAAGPDVVEFLSDHLGGDRALT
RSEIDKLITYCGAAGRVSLEDAQACVGDTARLELDDLAHAIAEGDAARALRTLERLRREG
TNAVAIVRSVMRHFTRLHFVAGQVAEGRSLDQVMPTLKPPVIFSQAARFRTQASRWPAVR
LAQALDLLLETEGALKSAGVLETPVMERLVLRLTRGAQTSARSG
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaccggggccgccgttcaggcctttttgaaaaatcccgatccccagatccgg
gttgttttggtctatggcccggatgaagggctggtgcgcgagcggctcgaccagttgctg
cgcaccgtggtggacgatcctggcgatccttttcgggtgtgcgagctgggcggcgacgat
ctggtgcgcgatcccgcccggctggccgacgaggcggcggccttgtccatggtcgggggg
cggcgggtggtgcggctgcgcgatgtgggcgacagccacacggcgcggctcaagccgttt
ttcgagcatccggtgggcgaggcgctgatcttggtgcaaggcggggcgctggggccgcgc
tcgtcgttgcggctgctggtcgagggcagcccgatggccgccgccctcccctgttatgcc
gacgagggccgcggcctggaaaccctggtgcgcgacatgctggccggggccaagctggcg
gcggggcccgatgttgtcgagtttctctccgaccatctgggcggcgaccgggccctgacc
cgctccgagattgacaagctgatcacctattgtggggccgccgggcgggtgagtctggaa
gacgcccaggcctgcgtgggcgataccgcccgcctggagttggacgacttggcccatgcc
attgccgaaggggatgcggcgcgggccctgcgcaccttggagcgcctgcgccgcgagggg
accaacgccgtggccattgtgcgcagtgtgatgcggcatttcacccggctgcattttgtg
gccgggcaggtggccgagggccgttccttggatcaggtgatgccgaccttgaagccgccg
gtgattttcagtcaggcggcccgctttcgcacccaggccagccgctggccggcggttcgg
ctggcgcaggccttggacttgttgttggagaccgagggggcgttgaagtcggccggggtc
ttggagacgccggtgatggagcgtttggttttgcggttgacgcggggggcgcaaacgtcg
gcgcgctcggggtga
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