Pararhodospirillum photometricum: RSPPHO_00378
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Entry
RSPPHO_00378 CDS
T01851
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rpm
Pararhodospirillum photometricum
Pathway
rpm00061
Fatty acid biosynthesis
rpm00071
Fatty acid degradation
rpm01100
Metabolic pathways
rpm01212
Fatty acid metabolism
rpm02024
Quorum sensing
rpm04146
Peroxisome
Module
rpm_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rpm00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RSPPHO_00378
00071 Fatty acid degradation
RSPPHO_00378
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RSPPHO_00378
09145 Cellular community - prokaryotes
02024 Quorum sensing
RSPPHO_00378
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rpm01004
]
RSPPHO_00378
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpm04147
]
RSPPHO_00378
Enzymes [BR:
rpm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RSPPHO_00378
Lipid biosynthesis proteins [BR:
rpm01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RSPPHO_00378
Exosome [BR:
rpm04147
]
Exosomal proteins
Exosomal proteins of breast milk
RSPPHO_00378
Exosomal proteins of breast cancer cells
RSPPHO_00378
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
CCG07004
UniProt:
H6SNT2
LinkDB
All DBs
Position
complement(491233..493146)
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AA seq
637 aa
AA seq
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MMSRRRPLPPDYCDVGRFDTFPKILAENARRWPDEVALREKEFGLWTPFTWAQYDETVRL
YALGLRRLGVRRGQAVALLGANRPEWVWGEIAAHALGCLSLGIYKDVLEEEAEYLLTYAE
ATVVFAEDEEQVDKLLGLEDRLPTVRHIVYCDPRGMRKYNDPRLISQEDLMALGRDLDRA
EPGLYAREVAAGSGDEVAMLCTTSGTTSRPKMAMIQAGPFLRHCLDYLESDPKGPGDNYV
SVLPLPWIMEQVYAVGQALIARTVVNFVEEEATTMADLREIGPSFVLLAPRVWESLAADV
RARMMESSPFKQRMFALGMKLGTQALAENRRSWLAEFILFRALRDRLGFTFLTSAATGGA
AMGPDTFRFFHAMGVPLKQLYGQTELSGAYTIHRGDDIDPETVGVAFAGSAVRIANPDSE
GVGEIVGRSQGLFAGYYKMAEAEDVEDGWLHTGDAGYLKPENGHLVVIDRVKDLATTSAG
VRFSPQFIENKLKFSPFIAEAVILGRDKPYLSAILCFRWSIVSKWAEQRAIAFTSYTNLA
AHPEVYALLRAEVEQVNKTLPPAQQVRKFLLLYKELDPDDGELTRTRKVRRGVIAEKYAK
EIDALYSGAPEVDVDTVITFQDGTRSRIQTRLKVETL
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgatgagccgtcgccgtcctttgccgcccgattactgtgatgtcggtcggttcgacacc
tttcccaagattctggccgagaacgcccggcgctggcccgatgaggtggcgctgcgcgaa
aaggagtttgggctgtggacgccttttacctgggcccagtacgacgagaccgtgcgcttg
tatgccctgggcctgcgccgcttgggggtgcgccggggacaggcggtggccctgcttggc
gccaaccggcccgagtgggtgtggggcgaaatcgccgcccatgccctgggctgcctgtcc
ttggggatttacaaggacgttctggaggaagaggccgagtatcttctgacctacgccgag
gcgacggtggtgttcgccgaggacgaggagcaggtcgataaactcctaggcctggaagat
cgcctgcccacggtgcgtcatatcgtgtactgcgatccacgcggcatgcgcaaatacaac
gacccccgccttatttcccaggaagacttgatggccctggggcgggatctggaccgggcc
gagccgggcttgtatgcccgcgaagtggcggccgggtcgggagacgaggtggccatgctg
tgcaccacctcgggcaccaccagccggcccaagatggcgatgatccaggccgggccgttc
ttgcgccactgcttggactatctggagtccgatcccaaggggcccggcgacaactatgtg
tcggtgctgcccctgccgtggatcatggagcaagtctatgccgtggggcaggccctgatc
gcgcgcacggtggtgaactttgtcgaggaagaagccaccaccatggccgacctgcgcgag
attggcccctcgttcgtgctgctggcaccgcgggtgtgggaatccttggccgccgatgtg
cgggcgcgcatgatggagtcctcgcccttcaagcaacgcatgtttgcgctgggcatgaag
ctggggacccaggccttggctgaaaaccgccggtcctggctggctgagttcatcttgttt
cgggcgctgcgcgatcgcttgggcttcaccttcctgaccagcgccgccactgggggcgcc
gccatggggcccgacaccttccggttttttcatgcgatgggggtgccgctgaagcagctc
tacggtcagaccgagctgtcgggcgcctacaccatccaccggggcgacgacattgatccc
gagaccgtgggcgtggcctttgccggcagcgcggtgcggattgccaatcccgacagcgag
ggggttggtgagatcgtcggccggagccagggcctgtttgccggctattacaagatggcc
gaagccgaggacgttgaggacggctggctgcacaccggcgatgccggctacctcaagccc
gaaaacggccatttggtcgtgatcgaccgtgtgaaggatctggcgacgacctcggccggg
gtgcggttctcgccgcagtttatcgagaacaagctgaagttctcgccctttatcgccgag
gcggtgatcttggggcgtgacaagccctatctgtcggccatcttgtgcttccgctggtcg
attgtgtccaagtgggccgagcagcgcgccattgcctttaccagttacaccaatctcgcg
gcccatcccgaggtctatgcgctgttgcgcgccgaggtggagcaggtcaataaaacgctg
ccgccggcacaacaagtgcgcaagttcctgctgctctacaaggaacttgacccggatgat
ggcgagctgacccgcacccgcaaggtgcgccggggtgttattgccgaaaaatacgctaaa
gagatcgatgcgttgtattccggcgcccccgaggtggacgtggatacggtcatcaccttc
caagatggcacgcgctcgcggattcaaacacgtctgaaggtggaaaccctgtaa
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