Pararhodospirillum photometricum: RSPPHO_00438
Help
Entry
RSPPHO_00438 CDS
T01851
Name
(GenBank) ABC-type protease/lipase transport system,ATPase and permease components
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
rpm
Pararhodospirillum photometricum
Pathway
rpm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rpm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RSPPHO_00438
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpm02000
]
RSPPHO_00438
02044 Secretion system [BR:
rpm02044
]
RSPPHO_00438
Transporters [BR:
rpm02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
RSPPHO_00438
Secretion system [BR:
rpm02044
]
Type I secretion system
Adhesin protein transporter
RSPPHO_00438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
AAA_15
AAA_23
AAA_16
AAA_22
AAA_29
AAA
ABC_ATPase
AAA_25
DUF3584
AAA_5
AAA_30
ORC-CDC6-like
AAA_33
SRP54
Mg_chelatase
NACHT
AAA_14
cobW
Motif
Other DBs
NCBI-ProteinID:
CCG07064
UniProt:
H6SNZ2
LinkDB
All DBs
Position
complement(564381..566153)
Genome browser
AA seq
590 aa
AA seq
DB search
MEAQKPFVAPPSGKPSWLRDLLAPLFPSFREVLALSLFVNIAALATPVFSLQIYDRVVYH
NGLSTLQGLAIGMAVLLVFDFIMRQARARILQTVALRLEAQVGQRLFDKMTALPLRVLES
RPAEEWLRLFRDVDVVRNTLSGASALLVCDLPFTVLFLGTVFLLAPPVGWVVVVALVLFV
GLALMSGRAIDQAALRERETLGGRDGLLAEIVRGRATVKALALETTLADVYRQHLAAQVQ
GSVRRGGLVDHFTNLGMVLSMTTTVAMTTVGALAILDHSLTVGGLIAANMLGGRLMSPLN
QLMGTWRGFAGFRQSAQRLGQVLALPEDRRVSALRLPPPSGRLTVVKASFHYTPDGPPCL
EEISLDLQPGGITALVGPNGSGKTTLLKLLVGLYPPASGRVLLDGADLAQFTRAELAGWI
GTLPQDITLFDGTVREAIAMGHPGLDDEAVREAAQTAGVHEMILDLPQGYATRVGEGGGL
LSGGMRQRLALARALAGKPPVLLLDEPSSSLDRAAEEALVETLARLATQRSVIVVTHSPL
LLARCQRVVVLNKGRVLAHGPAGEILPRLFPARRPVVPPAGAAPPAGVAS
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggaagctcaaaagccttttgtcgccccgccgtccgggaaaccctcctggcttcgggat
cttctggcgcccctttttcccagctttcgcgaagtgctggcgctctccttgttcgttaat
attgcggcgctcgccactccagtattttccttacagatttacgaccgtgtcgtgtatcac
aatggtctttccacccttcaggggctggcgatcggcatggcggtcttgctggtgtttgat
ttcatcatgcgccaagcccgggctcgcatcttacaaaccgtggctctgcgcctcgaagcc
caggtgggccagcggttgtttgacaagatgaccgccctgccgctgcgggtgctggaatcg
cgtccggccgaagagtggctgcgcttgttccgcgacgtcgatgtggtgcgcaacaccctc
tccggggcttcggcgttgctggtttgcgacctgccgtttaccgtgctgtttttgggcacg
gtcttccttctggccccgccggtgggctgggtggtggtggtggccctggttttgttcgtg
gggctggccctaatgtcggggcgggctattgatcaggccgcgctgcgcgagcgcgaaacc
ttgggcgggcgcgacggcctgctggcggaaatcgtgcgcgggcgcgctaccgtcaaggcc
ttggccctggagaccaccctggccgacgtctaccgccagcatctggcggcccaggtccag
gggtcggtgcgacgggggggcttggtggaccatttcaccaatctcggcatggtcttgtcg
atgaccaccaccgtcgccatgaccacggtgggcgccctggccattttggaccactccttg
accgtgggcgggctgatcgccgccaacatgctgggcgggcgcctgatgtcgccgctcaat
cagttgatgggcacatggcgcgggtttgcgggctttcgccagtcggcccagcgcctgggg
caagtcctggccctgcccgaagaccgccgggtcagtgccctcaggctgccgccgccctcg
gggcgtctgacggtggtcaaggcctcgttccactacacccccgatggccccccgtgtctg
gaggagatctccctggatcttcagcccggcggcatcaccgccctggtcgggcccaacggc
agtggcaaaaccaccttgttgaagctgctggtcggcctctatccgcccgcgtcgggccgc
gtgttgctcgacggggccgatctggcccagttcacccgcgccgaactggccggctggatc
ggcaccttgccgcaagacatcaccttgttcgatggcacagtgcgcgaggccatcgccatg
ggccatcccgggctcgacgacgaagcggtgcgcgaggccgcgcaaaccgcaggggttcac
gagatgatcttggaccttccccagggctacgccacccgggtgggcgagggaggaggcttg
ctgtccggcggcatgcgtcagcgtttggcgctcgcccgcgccttggccggcaaaccgcct
gtgctgctgctcgacgaaccgtcctcctcccttgatcgcgccgccgaggaagccctggtg
gaaaccctggcccgcctcgctacccagcgcagcgtgattgtcgtgacccacagtcccctg
ctgctggcccgctgccaacgcgtggtcgtgctcaacaaaggccgcgtcctagcccatggg
ccggccggcgagatcctgccacgtctgttcccggcgcgtcgccccgttgtcccgcctgcc
ggagcggccccgcccgccggagttgcctcatga
DBGET
integrated database retrieval system
