Pararhodospirillum photometricum: RSPPHO_00482
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Entry
RSPPHO_00482 CDS
T01851
Name
(GenBank) Transcriptional regulator, NifA subfamily, Fis family
KO
K02584
Nif-specific regulatory protein
Organism
rpm
Pararhodospirillum photometricum
Pathway
rpm02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rpm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RSPPHO_00482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rpm03000
]
RSPPHO_00482
Transcription factors [BR:
rpm03000
]
Prokaryotic type
Helix-turn-helix
Other families
RSPPHO_00482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
HTH_8
AAA_5
GAF_3
AAA_2
AAA
AAA_16
bpMoxR
nSTAND3
HTH_28
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
CCG07108
UniProt:
H6SP36
LinkDB
All DBs
Position
626348..627973
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AA seq
541 aa
AA seq
DB search
MTPDTPLNTDFDVKDFVDEFTHCFTGECRVSILPILAQINKVITDSADLATLVAITLDVM
RQRLRMARGIMMLYDRSSETIFIHESFGLTEEEKGRGIYAPGEGITGRVVETGKAIIVPR
LGESTDFLDRTRSHTDKRLSNCAFFCVPIVHAQKVLGTICAERVYMNQRLMRQDAEILGM
LASLIAPAVELYLIENVDKVRLENENRRLKNALRQRFKPSNIIGNAKPMQDVYDLIQKVA
ATKATVLILGESGVGKELVANAIHYNSPSAEGPFIKANCAALPESLAESELFGHEKGSFT
GALGLHKGYFEQADGGTIFLDEVGELSLTMQAKLLRVLQEKVFERVGGSRPVKIDVRIIA
ATNRDLGEMVQNGTFREDLFYRLNVFPLTIPALRDRGTDVITLADHFVTVFATENNKSVK
RISTPALNMLMSYHWPGNVRELENVMERAVILSEGEVIHAYDLPPSLQTPRESGTVLGGT
LEARMRALEYEMIVEALKNTNGNVGEAARELGLSRRMLGVRMEKYTLNYKTFRMAGLQRK
A
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgacccccgataccccgctgaacaccgacttcgatgtcaaagattttgttgacgaattt
acgcattgttttacaggagaatgtcgtgtcagcattcttcctattcttgcgcaaatcaat
aaggtcattaccgacagcgccgatctggccacgttggtggccatcacccttgatgtcatg
cgccaacgcctgcgcatggcccgcgggatcatgatgctttatgatcggtcctcggagacc
atttttatccacgaaagctttggcctaactgaagaggaaaaagggcgcggaatctacgcg
ccaggggagggaatcacaggaagagtggttgaaaccggcaaggcaatcatcgtgccgcgc
ctgggggagagcaccgatttcctggaccgcacccgatctcacaccgacaagcgcctgtcc
aattgcgcctttttttgcgtccccattgtccacgcccaaaaagttctgggaacaatctgc
gccgagcgggtttacatgaaccagcgcctgatgcgtcaggacgcggaaatcctgggcatg
ctcgcctcgctgatcgcgccggcggttgagctttatctgattgaaaatgtcgataaggtc
cgcctggagaacgaaaatcgccgcctcaaaaacgccctgcgccagcgcttcaagccctcc
aacatcatcggcaacgccaagccgatgcaagacgtctacgacctgatccaaaaggtggcg
gccaccaaggccacggtgctgatcctgggcgaaagcggggtgggcaaggagttggtggca
aacgccatccactacaacagccccagtgccgagggccccttcatcaaggccaactgcgcc
gccctgcccgaaagcctcgccgaaagcgagctgtttggtcacgaaaagggatcgttcacc
ggggcccttggcctgcacaagggctattttgagcaagctgacggcggcaccatcttcctc
gatgaggtgggcgaactgagcctgaccatgcaagccaaactccttcgcgttcttcaagaa
aaagtgttcgagcgcgtgggcggcagccggccggtcaagatcgacgtacgcatcatcgcc
gctaccaaccgcgacctgggcgagatggtacaaaacggaacgttccgcgaagacctgttt
taccgcctcaatgtcttccccctaaccattcccgccctgcgggaccgggggacggatgtc
atcaccctcgccgatcacttcgtcacggtgtttgccaccgagaacaacaagagcgtcaag
cggatctccaccccggctctcaacatgctcatgagttatcactggcccggcaacgtccgc
gagctggaaaacgtgatggagcgggcggtgatcttaagcgagggcgaggtcattcacgcc
tatgacctgcccccctccctccagaccccgcgcgaaagcggcaccgtgctgggcggcacc
ctggaggcccggatgcgggcgttggaatacgagatgatcgttgaggcgctcaagaacacc
aatggcaatgtgggcgaggcagcgcgggagttgggactgtcgcgtcggatgctgggggtc
cggatggaaaagtacactctgaattacaaaacgtttcgcatggcgggattgcagcgcaag
gcgtga
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