Pararhodospirillum photometricum: RSPPHO_00676
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Entry
RSPPHO_00676 CDS
T01851
Name
(GenBank) ErfK/YbiS/YcfS/YnhG
KO
K21470
L,D-transpeptidase YcbB
Organism
rpm
Pararhodospirillum photometricum
Brite
KEGG Orthology (KO) [BR:
rpm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rpm01002
]
RSPPHO_00676
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rpm01011
]
RSPPHO_00676
Peptidases and inhibitors [BR:
rpm01002
]
Cysteine peptidases
Family C82
RSPPHO_00676
Peptidoglycan biosynthesis and degradation proteins [BR:
rpm01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
RSPPHO_00676
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
CCG07302
UniProt:
H6SQ32
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All DBs
Position
complement(858686..860440)
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AA seq
584 aa
AA seq
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MVLVLNRRGLPRRVAWSGGVWAGARGAWWWAVSWLEPPGAGMPVPRPPPPPPPPIRPPPS
EAPAPLSVPEATSVSAAPLLGALGQDPLGSHLAALYAERLYAPFWVEPAGLTPRGRLLLD
TLGRAPEEGLDSGAYDLESIGQRLQSGTVEDRLVAEALISRATARFFLDRLLGQTRRLVS
FDEQRSLLQREEGRTLQGLLADAAAAPSLPAMLASLEPRSLQYRRLIGALAHAHKQHAAG
ARRPASGGEPALATMPGPSIRPGDQDPRVPLVRRRLGGGGGASPVYDATLVDAVRAFQSV
HGLTPDGILGRETLSELAHGPAVGVDRLRLALERWRLLPRNLGSIHLLVNVPQYELFVYE
GQREALRMRVAVGRPNDPTPLFSDDIDYMEFNPYWNVPASIAREEVLPRQAEDPAYLARR
GFTLVPRDAGQREEDAEAVSARSYRLRQDPGPNNPLGTVKFMFPNKYAVYLHDTNAPRVF
GRSFRAVSHGCVRVQEPAALADYLLGRFTARPGQTALSFKGTRPRVVRLAWPAPVHLTYF
TAWIDAPGGPVRYSPDVYEQDPPLVRRLEDSVAKPGSKETMAAR
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggtcttggttctcaatcggcggggtcttccgaggcgcgtggcgtggtccggcggcgtc
tgggccggggctcgcggggcttggtggtgggctgtttcctggttggaaccgcctggggcg
ggaatgccggtgccacggccgccgcccccgcccccgcccccgatccggccccccccctcc
gaggctccggctcccctcagtgtgcccgaggccaccagtgtgagtgccgccccactgctg
ggcgccctggggcaagatcccctgggcagtcatctcgccgctctgtatgccgagcgcctc
tacgcgccgttttgggttgagccggctggcttgaccccacgggggcgcttgctgctcgac
accttgggccgagcccccgaggaaggcctggattctggcgcctatgatttggagagcatc
ggccagcgtttgcaaagcggaacggtcgaggatcggctggttgccgaggccctgatcagc
cgggccaccgcccgcttctttctcgatcgcctcctgggccagacccgccgtcttgtctcc
tttgacgaacagcgctctctcttgcagcgcgaggaaggccgcactctccagggcttgctg
gcggacgccgccgccgcaccgtctctcccggcgatgttggccagcctcgaaccccgctcg
ctccagtaccgccgccttatcggcgccctcgctcacgcccataagcaacatgccgccggc
gcccggcgcccggcctcggggggcgaacccgccttggccaccatgcccggcccctccatt
cggcccggcgatcaggatccccgagtgcccctggtgcgtcggcgtctggggggaggaggc
ggggcttcgcccgtgtacgacgccacccttgtggacgccgtgcgagcctttcaaagcgtc
catggcctgacccccgatggcatcttgggccgcgaaaccttgagcgaactggcgcatggc
ccggccgtgggggtcgatcgtctgcgccttgccctggagcgctggcgcctgctgccgcgc
aacctggggtcgattcatctcttggtcaatgtgccgcagtacgagctttttgtgtatgag
ggccagcgcgaggccttgcgcatgcgcgttgcggtcggccggcccaatgacccgacgccg
ctgttcagcgacgacattgattatatggaattcaacccctactggaatgttcccgcctcc
atcgcccgggaggaagtcttgccgcgtcaggccgaggatccggcctatctcgcgcgccgc
ggcttcacgttggtaccacgcgacgccggccaacgcgaggaggacgccgaggccgtgtct
gcccgctcctaccgtctgcgccaggatccgggccccaacaaccccttgggaacggtcaag
ttcatgttcccgaacaaatacgcggtctaccttcacgacaccaacgccccaagggtcttc
gggcggtcctttcgggcggtgagccatggctgcgtccgcgttcaggagccggcagccctc
gccgattacctcctggggcgctttacggcgcgaccggggcaaacggctctgtcctttaag
gggacgcgcccccgggtggttcggctggcttggccggcccccgtgcatttgacctacttc
acagcctggatcgatgccccgggcggccccgtgcgctatagcccggatgtctacgaacaa
gatccgccgctggtgcggcgcctggaagactcggtcgccaagcccggcagcaaggagacc
atggctgcgcgctga
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